Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPL3P39023 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.11■□□□□ 0.81
RPL3P39023 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPL3P39023 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.1■□□□□ 0.81
RPL3P39023 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.1■□□□□ 0.81
RPL3P39023 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RPL3P39023 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
RPL3P39023 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.1■□□□□ 0.81
RPL3P39023 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.1■□□□□ 0.81
RPL3P39023 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RPL3P39023 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
RPL3P39023 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.1■□□□□ 0.81
RPL3P39023 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.1■□□□□ 0.81
RPL3P39023 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPL3P39023 AC005229.4-201ENST00000610085 2198 ntBASIC20.1■□□□□ 0.81
RPL3P39023 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
RPL3P39023 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RPL3P39023 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.09■□□□□ 0.81
RPL3P39023 AC008764.7-201ENST00000593779 1081 ntBASIC20.09■□□□□ 0.81
RPL3P39023 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.09■□□□□ 0.81
RPL3P39023 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPL3P39023 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPL3P39023 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPL3P39023 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPL3P39023 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RPL3P39023 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.08■□□□□ 0.81
RPL3P39023 EDA-201ENST00000338901 1233 ntBASIC20.08■□□□□ 0.81
RPL3P39023 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPL3P39023 AC099791.1-201ENST00000416440 715 ntBASIC20.08■□□□□ 0.81
RPL3P39023 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.08■□□□□ 0.81
RPL3P39023 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RPL3P39023 AC096631.2-201ENST00000436136 790 ntBASIC20.08■□□□□ 0.81
RPL3P39023 PBX2P1-201ENST00000493219 1291 ntBASIC20.08■□□□□ 0.81
RPL3P39023 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPL3P39023 AC106739.1-201ENST00000617035 715 ntBASIC20.08■□□□□ 0.81
RPL3P39023 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPL3P39023 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.08■□□□□ 0.8
RPL3P39023 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.08■□□□□ 0.8
RPL3P39023 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.07■□□□□ 0.8
RPL3P39023 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.07■□□□□ 0.8
RPL3P39023 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.07■□□□□ 0.8
RPL3P39023 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
RPL3P39023 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.07■□□□□ 0.8
RPL3P39023 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.07■□□□□ 0.8
RPL3P39023 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.07■□□□□ 0.8
RPL3P39023 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPL3P39023 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPL3P39023 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPL3P39023 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
RPL3P39023 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPL3P39023 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPL3P39023 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPL3P39023 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.06■□□□□ 0.8
RPL3P39023 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.06■□□□□ 0.8
RPL3P39023 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.06■□□□□ 0.8
RPL3P39023 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.06■□□□□ 0.8
RPL3P39023 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
RPL3P39023 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.06■□□□□ 0.8
RPL3P39023 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.06■□□□□ 0.8
RPL3P39023 AC105233.4-201ENST00000642045 216 ntBASIC20.06■□□□□ 0.8
RPL3P39023 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPL3P39023 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms