Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX11P35716 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX11P35716 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX11P35716 AF106564.1-201ENST00000607058 2553 ntBASIC20.59■□□□□ 0.89
SOX11P35716 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SOX11P35716 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX11P35716 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SOX11P35716 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 AC104564.3-201ENST00000582367 638 ntBASIC20.59■□□□□ 0.89
SOX11P35716 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX11P35716 AC092666.2-201ENST00000613287 246 ntBASIC20.59■□□□□ 0.89
SOX11P35716 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX11P35716 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SOX11P35716 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SOX11P35716 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SOX11P35716 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX11P35716 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX11P35716 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX11P35716 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SOX11P35716 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX11P35716 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SOX11P35716 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX11P35716 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SOX11P35716 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.58■□□□□ 0.89
SOX11P35716 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SOX11P35716 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.58■□□□□ 0.89
SOX11P35716 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX11P35716 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.58■□□□□ 0.88
SOX11P35716 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX11P35716 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SOX11P35716 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SOX11P35716 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
SOX11P35716 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SOX11P35716 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.57■□□□□ 0.88
SOX11P35716 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.57■□□□□ 0.88
SOX11P35716 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.57■□□□□ 0.88
SOX11P35716 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SOX11P35716 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX11P35716 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SOX11P35716 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX11P35716 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.56■□□□□ 0.88
SOX11P35716 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.56■□□□□ 0.88
SOX11P35716 OR2I1P-207ENST00000453522 948 ntBASIC20.56■□□□□ 0.88
SOX11P35716 IGHV3-19-201ENST00000521488 291 ntBASIC20.56■□□□□ 0.88
SOX11P35716 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.56■□□□□ 0.88
SOX11P35716 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX11P35716 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SOX11P35716 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.56■□□□□ 0.88
SOX11P35716 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SOX11P35716 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX11P35716 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.56■□□□□ 0.88
SOX11P35716 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SOX11P35716 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOX11P35716 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.55■□□□□ 0.88
SOX11P35716 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.55■□□□□ 0.88
SOX11P35716 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX11P35716 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX11P35716 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX11P35716 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SOX11P35716 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOX11P35716 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
SOX11P35716 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SOX11P35716 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms