Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.92■■□□□ 1.9
RFC4P35249 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.92■■□□□ 1.9
RFC4P35249 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.92■■□□□ 1.9
RFC4P35249 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 KRT16P2-201ENST00000414673 1423 ntBASIC26.91■■□□□ 1.9
RFC4P35249 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
RFC4P35249 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
RFC4P35249 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RFC4P35249 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.91■■□□□ 1.9
RFC4P35249 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RFC4P35249 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.91■■□□□ 1.9
RFC4P35249 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.91■■□□□ 1.9
RFC4P35249 AC073648.6-201ENST00000641589 218 ntBASIC26.91■■□□□ 1.9
RFC4P35249 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFC4P35249 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.9■■□□□ 1.9
RFC4P35249 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.9■■□□□ 1.9
RFC4P35249 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.9■■□□□ 1.9
RFC4P35249 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.9■■□□□ 1.9
RFC4P35249 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.9■■□□□ 1.9
RFC4P35249 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.9■■□□□ 1.9
RFC4P35249 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
RFC4P35249 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFC4P35249 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RFC4P35249 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFC4P35249 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFC4P35249 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.89■■□□□ 1.9
RFC4P35249 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.89■■□□□ 1.9
RFC4P35249 AP003097.1-201ENST00000530657 1135 ntBASIC26.89■■□□□ 1.9
RFC4P35249 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.89■■□□□ 1.9
RFC4P35249 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFC4P35249 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.89■■□□□ 1.9
RFC4P35249 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RFC4P35249 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFC4P35249 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFC4P35249 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
RFC4P35249 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RFC4P35249 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.88■■□□□ 1.89
RFC4P35249 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.88■■□□□ 1.89
RFC4P35249 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.88■■□□□ 1.89
RFC4P35249 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RFC4P35249 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFC4P35249 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.87■■□□□ 1.89
RFC4P35249 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFC4P35249 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.87■■□□□ 1.89
RFC4P35249 LSM12P1-201ENST00000411836 588 ntBASIC26.87■■□□□ 1.89
RFC4P35249 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RFC4P35249 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.87■■□□□ 1.89
RFC4P35249 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
RFC4P35249 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.87■■□□□ 1.89
RFC4P35249 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RFC4P35249 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
RFC4P35249 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.86■■□□□ 1.89
RFC4P35249 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.86■■□□□ 1.89
RFC4P35249 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.86■■□□□ 1.89
RFC4P35249 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.86■■□□□ 1.89
RFC4P35249 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 AC243732.1-201ENST00000612648 864 ntBASIC26.86■■□□□ 1.89
RFC4P35249 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFC4P35249 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
RFC4P35249 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFC4P35249 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.85■■□□□ 1.89
RFC4P35249 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.85■■□□□ 1.89
RFC4P35249 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFC4P35249 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
RFC4P35249 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFC4P35249 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.85■■□□□ 1.89
RFC4P35249 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFC4P35249 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.84■■□□□ 1.89
RFC4P35249 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.84■■□□□ 1.89
RFC4P35249 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.84■■□□□ 1.89
RFC4P35249 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFC4P35249 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFC4P35249 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFC4P35249 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFC4P35249 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
RFC4P35249 AC008550.1-201ENST00000511500 884 ntBASIC26.84■■□□□ 1.89
RFC4P35249 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
RFC4P35249 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.84■■□□□ 1.89
RFC4P35249 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.83■■□□□ 1.89
RFC4P35249 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFC4P35249 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.83■■□□□ 1.89
RFC4P35249 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms