Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.385e-6■■■□□ 17.1
CSTF2P33240 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC11.33□□□□□ -0.66e-6■■■□□ 17.1
CSTF2P33240 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.017e-6■■■□□ 17.1
CSTF2P33240 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.87□□□□□ -0.037e-6■■■□□ 17.1
CSTF2P33240 C18orf25-202ENST00000588730 586 ntTSL 512.04□□□□□ -0.487e-6■■■□□ 17.1
CSTF2P33240 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.52■□□□□ 0.246e-7■■■□□ 17.1
CSTF2P33240 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.056e-7■■■□□ 17.1
CSTF2P33240 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.11□□□□□ -1.116e-7■■■□□ 17.1
CSTF2P33240 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.82□□□□□ -1.166e-7■■■□□ 17.1
CSTF2P33240 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.222e-8■■■□□ 17
CSTF2P33240 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.242e-8■■■□□ 17
CSTF2P33240 ZC3H7A-205ENST00000571198 2343 ntTSL 214.71□□□□□ -0.052e-6■■■□□ 17
CSTF2P33240 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.882e-6■■■□□ 17
CSTF2P33240 TRIO-218ENST00000512070 8907 ntTSL 214.22□□□□□ -0.137e-7■■■□□ 17
CSTF2P33240 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.392e-20■■■□□ 17
CSTF2P33240 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.7□□□□□ -0.382e-20■■■□□ 17
CSTF2P33240 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-20■■■□□ 17
CSTF2P33240 RPS15A-211ENST00000575669 3828 nt7.12□□□□□ -1.272e-20■■■□□ 17
CSTF2P33240 RPS15A-208ENST00000572008 797 ntTSL 57.04□□□□□ -1.282e-20■■■□□ 17
CSTF2P33240 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.19□□□□□ -1.582e-20■■■□□ 17
CSTF2P33240 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-202ENST00000562935 427 ntTSL 25.12□□□□□ -1.592e-20■■■□□ 17
CSTF2P33240 RPS15A-207ENST00000569365 481 ntTSL 34.47□□□□□ -1.692e-20■■■□□ 17
CSTF2P33240 RPS15A-210ENST00000574723 418 ntTSL 33.88□□□□□ -1.792e-20■■■□□ 17
CSTF2P33240 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.586e-7■■■□□ 17
CSTF2P33240 KIF13A-211ENST00000507576 529 ntTSL 322.19■■□□□ 1.147e-6■■■□□ 17
CSTF2P33240 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.437e-6■■■□□ 17
CSTF2P33240 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.827e-6■■■□□ 17
CSTF2P33240 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.927e-6■■■□□ 17
CSTF2P33240 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.957e-6■■■□□ 17
CSTF2P33240 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.257e-6■■■□□ 17
CSTF2P33240 KIF13A-209ENST00000505588 212 ntTSL 52.78□□□□□ -1.967e-6■■■□□ 17
CSTF2P33240 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.426e-6■■■□□ 17
CSTF2P33240 MACF1-227ENST00000524432 4338 ntTSL 516.87■□□□□ 0.296e-6■■■□□ 17
CSTF2P33240 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.09■□□□□ 0.176e-6■■■□□ 17
CSTF2P33240 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.096e-6■■■□□ 17
CSTF2P33240 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.046e-6■■■□□ 17
CSTF2P33240 ZNF37A-204ENST00000479469 1148 ntTSL 513.83□□□□□ -0.26e-6■■■□□ 17
CSTF2P33240 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.54□□□□□ -0.243e-11■■■□□ 17
CSTF2P33240 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.316e-6■■■□□ 17
CSTF2P33240 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.01□□□□□ -0.336e-6■■■□□ 17
CSTF2P33240 ADCY9-207ENST00000576936 697 ntTSL 512.9□□□□□ -0.346e-6■■■□□ 17
CSTF2P33240 APOPT1-205ENST00000474271 540 ntTSL 412.04□□□□□ -0.486e-6■■■□□ 17
CSTF2P33240 DLEU1-210ENST00000469095 1736 ntTSL 511.57□□□□□ -0.566e-6■■■□□ 17
CSTF2P33240 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC11.42□□□□□ -0.586e-6■■■□□ 17
CSTF2P33240 DLEU1-204ENST00000462427 1119 ntTSL 1 (best)11.07□□□□□ -0.646e-6■■■□□ 17
CSTF2P33240 DLEU1-213ENST00000470593 668 ntTSL 1 (best)10.83□□□□□ -0.686e-6■■■□□ 17
CSTF2P33240 DLEU1-233ENST00000491482 431 ntTSL 1 (best)10.77□□□□□ -0.696e-6■■■□□ 17
CSTF2P33240 DLEU1-217ENST00000474630 518 ntTSL 510.59□□□□□ -0.716e-6■■■□□ 17
CSTF2P33240 NEDD4L-224ENST00000588712 2066 ntTSL 210□□□□□ -0.812e-16■■■□□ 17
CSTF2P33240 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.96e-6■■■□□ 17
CSTF2P33240 KLC1-223ENST00000557172 540 ntTSL 49.32□□□□□ -0.926e-6■■■□□ 17
CSTF2P33240 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.75□□□□□ -1.013e-11■■■□□ 17
CSTF2P33240 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.3□□□□□ -1.086e-6■■■□□ 17
CSTF2P33240 ZNF37A-203ENST00000477790 685 ntTSL 28.16□□□□□ -1.16e-6■■■□□ 17
CSTF2P33240 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.116e-6■■■□□ 17
CSTF2P33240 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.276e-6■■■□□ 17
CSTF2P33240 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.476e-6■■■□□ 17
CSTF2P33240 SF3B1-210ENST00000482158 772 ntTSL 25.1□□□□□ -1.593e-11■■■□□ 17
CSTF2P33240 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.666e-6■■■□□ 17
CSTF2P33240 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.55□□□□□ -1.683e-11■■■□□ 17
CSTF2P33240 SF3B1-208ENST00000470268 2003 ntTSL 24.46□□□□□ -1.73e-11■■■□□ 17
CSTF2P33240 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.736e-6■■■□□ 17
CSTF2P33240 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.86e-6■■■□□ 17
CSTF2P33240 DLEU1-215ENST00000472136 720 ntTSL 1 (best)3.71□□□□□ -1.826e-6■■■□□ 17
CSTF2P33240 DLEU1-202ENST00000460525 1031 ntTSL 1 (best)3.67□□□□□ -1.826e-6■■■□□ 17
CSTF2P33240 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.14■□□□□ 0.012e-8■■■□□ 17
CSTF2P33240 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.112e-8■■■□□ 17
CSTF2P33240 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.24□□□□□ -0.292e-8■■■□□ 17
CSTF2P33240 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.42e-8■■■□□ 17
CSTF2P33240 ATF7-210ENST00000588232 531 ntTSL 410.95□□□□□ -0.662e-8■■■□□ 17
CSTF2P33240 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.862e-8■■■□□ 17
CSTF2P33240 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.952e-8■■■□□ 17
CSTF2P33240 ATF7-208ENST00000551480 473 ntTSL 56.54□□□□□ -1.362e-8■■■□□ 17
CSTF2P33240 ATF7-209ENST00000588078 531 ntTSL 55.38□□□□□ -1.552e-8■■■□□ 17
CSTF2P33240 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.291e-7■■■□□ 17
CSTF2P33240 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.253e-7■■■□□ 16.9
CSTF2P33240 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.843e-7■■■□□ 16.9
CSTF2P33240 SHANK2-220ENST00000608988 1879 ntTSL 521.5■■□□□ 1.031e-6■■■□□ 16.9
CSTF2P33240 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.96■■□□□ 1.113e-11■■■□□ 16.9
CSTF2P33240 ZNRF1-207ENST00000568351 964 ntTSL 314.14□□□□□ -0.153e-11■■■□□ 16.9
CSTF2P33240 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.33□□□□□ -0.286e-7■■■□□ 16.9
CSTF2P33240 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC12.64□□□□□ -0.396e-7■■■□□ 16.9
CSTF2P33240 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC12.35□□□□□ -0.436e-7■■■□□ 16.9
CSTF2P33240 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.526e-7■■■□□ 16.9
CSTF2P33240 ZNRF1-204ENST00000566244 3980 nt9.58□□□□□ -0.883e-11■■■□□ 16.9
CSTF2P33240 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.946e-7■■■□□ 16.9
CSTF2P33240 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.697e-6■■■□□ 16.9
CSTF2P33240 IMMP1L-207ENST00000531331 437 ntTSL 33.2□□□□□ -1.96e-7■■■□□ 16.9
CSTF2P33240 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC11.86□□□□□ -0.517e-6■■■□□ 16.8
CSTF2P33240 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.972e-7■■■□□ 16.8
CSTF2P33240 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.982e-7■■■□□ 16.8
CSTF2P33240 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC9.02□□□□□ -0.976e-8■■■□□ 16.8
CSTF2P33240 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.82□□□□□ -16e-8■■■□□ 16.8
CSTF2P33240 ZNF780B-205ENST00000595995 393 ntTSL 56.8□□□□□ -1.326e-8■■■□□ 16.8
CSTF2P33240 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.656e-8■■■□□ 16.8
CSTF2P33240 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.656e-8■■■□□ 16.8
CSTF2P33240 SMAD2-208ENST00000587269 1042 ntTSL 329.23■■■□□ 2.276e-6■■■□□ 16.8
CSTF2P33240 XXYLT1-210ENST00000491138 738 ntTSL 320.73■□□□□ 0.916e-6■■■□□ 16.8
CSTF2P33240 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.25■□□□□ 0.836e-6■■■□□ 16.8
Retrieved 100 of 6,735 protein–RNA pairs in 44.6 ms