Protein–RNA interactions for Protein: P31385

DEP1, Transcriptional regulatory protein DEP1, yeastyeast

Predictions only

Length 405 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEP1P31385 NSA1YGL111W 1392 nt3.14□□□□□ -1.91
DEP1P31385 SLH1YGR271W 5904 nt3.14□□□□□ -1.91
DEP1P31385 IZH1YDR492W 951 nt3.14□□□□□ -1.91
DEP1P31385 YDR535CYDR535C 501 nt3.14□□□□□ -1.91
DEP1P31385 YGL177WYGL177W 348 nt3.14□□□□□ -1.91
DEP1P31385 CUP1-1YHR053C 186 nt3.14□□□□□ -1.91
DEP1P31385 CUP1-2YHR055C 186 nt3.14□□□□□ -1.91
DEP1P31385 YOR082CYOR082C 342 nt3.14□□□□□ -1.91
DEP1P31385 ATG5YPL149W 885 nt3.14□□□□□ -1.91
DEP1P31385 AKR1YDR264C 2295 nt3.14□□□□□ -1.91
DEP1P31385 PFF1YBR074W 2931 nt3.14□□□□□ -1.91
DEP1P31385 SRB8YCR081W 4284 nt3.14□□□□□ -1.91
DEP1P31385 YTA7YGR270W 4140 nt3.14□□□□□ -1.91
DEP1P31385 PRM15YMR278W 1869 nt3.13□□□□□ -1.91
DEP1P31385 CCM1YGR150C 2595 nt3.13□□□□□ -1.91
DEP1P31385 SDS23YGL056C 1584 nt3.13□□□□□ -1.91
DEP1P31385 RPL35BYDL136W 363 nt3.13□□□□□ -1.91
DEP1P31385 YDR209CYDR209C 414 nt3.13□□□□□ -1.91
DEP1P31385 WBP1YEL002C 1293 nt3.13□□□□□ -1.91
DEP1P31385 GEP7YGL057C 864 nt3.13□□□□□ -1.91
DEP1P31385 CMC1YKL137W 336 nt3.13□□□□□ -1.91
DEP1P31385 TDA8YAL064C-A 381 nt3.13□□□□□ -1.91
DEP1P31385 BOS1YLR078C 735 nt3.13□□□□□ -1.91
DEP1P31385 COS1YNL336W 1146 nt3.13□□□□□ -1.91
DEP1P31385 IRC13YOR235W 315 nt3.13□□□□□ -1.91
DEP1P31385 APA1YCL050C 966 nt3.13□□□□□ -1.91
DEP1P31385 YPR148CYPR148C 1308 nt3.13□□□□□ -1.91
DEP1P31385 YIR023C-AYIR023C-A 324 nt3.12□□□□□ -1.91
DEP1P31385 YJL175WYJL175W 513 nt3.12□□□□□ -1.91
DEP1P31385 SWD2YKL018W 990 nt3.12□□□□□ -1.91
DEP1P31385 YAR075WYAR075W 474 nt3.12□□□□□ -1.91
DEP1P31385 YLR365WYLR365W 333 nt3.12□□□□□ -1.91
DEP1P31385 FYV6YNL133C 522 nt3.12□□□□□ -1.91
DEP1P31385 ATG34YOL083W 1239 nt3.12□□□□□ -1.91
DEP1P31385 YBR013CYBR013C 390 nt3.12□□□□□ -1.91
DEP1P31385 BTS1YPL069C 1008 nt3.12□□□□□ -1.91
DEP1P31385 ICS2YBR157C 768 nt3.12□□□□□ -1.91
DEP1P31385 MIC60YKR016W 1623 nt3.11□□□□□ -1.91
DEP1P31385 LRG1YDL240W 3054 nt3.11□□□□□ -1.91
DEP1P31385 PHO5YBR093C 1404 nt3.11□□□□□ -1.91
DEP1P31385 SHQ1YIL104C 1524 nt3.11□□□□□ -1.91
DEP1P31385 YCR100CYCR100C 951 nt3.11□□□□□ -1.91
DEP1P31385 BSC1YDL037C 987 nt3.11□□□□□ -1.91
DEP1P31385 RPS22AYJL190C 393 nt3.11□□□□□ -1.91
DEP1P31385 YAL064WYAL064W 285 nt3.11□□□□□ -1.91
DEP1P31385 YLR366WYLR366W 306 nt3.11□□□□□ -1.91
DEP1P31385 SYC1YOR179C 567 nt3.11□□□□□ -1.91
DEP1P31385 YHR202WYHR202W 1809 nt3.11□□□□□ -1.91
DEP1P31385 YIL082W-AYIL082W-A 4497 nt3.11□□□□□ -1.91
DEP1P31385 CUE3YGL110C 1875 nt3.11□□□□□ -1.91
DEP1P31385 DSS1YMR287C 2910 nt3.1□□□□□ -1.91
DEP1P31385 GWT1YJL091C 1473 nt3.1□□□□□ -1.91
DEP1P31385 ART10YLR392C 1557 nt3.1□□□□□ -1.91
DEP1P31385 SEC59YMR013C 1560 nt3.1□□□□□ -1.91
DEP1P31385 YCR085WYCR085W 354 nt3.1□□□□□ -1.91
DEP1P31385 HTD2YHR067W 843 nt3.1□□□□□ -1.91
DEP1P31385 YJR111CYJR111C 852 nt3.1□□□□□ -1.91
DEP1P31385 YJR128WYJR128W 360 nt3.1□□□□□ -1.91
DEP1P31385 AIM26YKL037W 357 nt3.1□□□□□ -1.91
DEP1P31385 DUG3YNL191W 1074 nt3.1□□□□□ -1.91
DEP1P31385 LCL1YPL056C 306 nt3.1□□□□□ -1.91
DEP1P31385 PIN3YPR154W 648 nt3.1□□□□□ -1.91
DEP1P31385 SLS1YLR139C 1932 nt3.1□□□□□ -1.91
DEP1P31385 BEM4YPL161C 1902 nt3.1□□□□□ -1.91
DEP1P31385 SEC15YGL233W 2733 nt3.1□□□□□ -1.91
DEP1P31385 YIG1YPL201C 1386 nt3.1□□□□□ -1.91
DEP1P31385 NOP4YPL043W 2058 nt3.1□□□□□ -1.91
DEP1P31385 YPL109CYPL109C 1974 nt3.09□□□□□ -1.91
DEP1P31385 ECM21YBL101C 3354 nt3.09□□□□□ -1.91
DEP1P31385 NHP10YDL002C 612 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)DtK(UUU)D 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)G1tK(UUU)G1 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)G2tK(UUU)G2 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)KtK(UUU)K 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)LtK(UUU)L 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)OtK(UUU)O 73 nt3.09□□□□□ -1.91
DEP1P31385 tK(UUU)PtK(UUU)P 73 nt3.09□□□□□ -1.91
DEP1P31385 YGR026WYGR026W 837 nt3.09□□□□□ -1.91
DEP1P31385 ERG25YGR060W 930 nt3.09□□□□□ -1.91
DEP1P31385 PFS1YHR185C 714 nt3.09□□□□□ -1.91
DEP1P31385 YIR021W-AYIR021W-A 213 nt3.09□□□□□ -1.91
DEP1P31385 MDV1YJL112W 2145 nt3.09□□□□□ -1.91
DEP1P31385 FIP1YJR093C 984 nt3.09□□□□□ -1.91
DEP1P31385 YMR122W-AYMR122W-A 255 nt3.09□□□□□ -1.91
DEP1P31385 RCE1YMR274C 948 nt3.09□□□□□ -1.91
DEP1P31385 YNL226WYNL226W 411 nt3.09□□□□□ -1.91
DEP1P31385 YOR062CYOR062C 807 nt3.09□□□□□ -1.91
DEP1P31385 MRPL51YPR100W 423 nt3.09□□□□□ -1.91
DEP1P31385 snR44snR44 211 nt3.09□□□□□ -1.91
DEP1P31385 MRPL27YBR282W 441 nt3.09□□□□□ -1.91
DEP1P31385 TRM12YML005W 1389 nt3.09□□□□□ -1.92
DEP1P31385 MIG1YGL035C 1515 nt3.09□□□□□ -1.92
DEP1P31385 RPS29BYDL061C 171 nt3.08□□□□□ -1.92
DEP1P31385 IRC18YJL037W 675 nt3.08□□□□□ -1.92
DEP1P31385 YNL035CYNL035C 1170 nt3.08□□□□□ -1.92
DEP1P31385 OCA2YNL056W 594 nt3.08□□□□□ -1.92
DEP1P31385 CAF20YOR276W 486 nt3.08□□□□□ -1.92
DEP1P31385 NIP7YPL211W 546 nt3.08□□□□□ -1.92
DEP1P31385 CCL1YPR025C 1182 nt3.08□□□□□ -1.92
DEP1P31385 HEH2YDR458C 1992 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms