Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.32■□□□□ 0.52
CD40P25942 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 AC006970.2-201ENST00000450065 779 ntBASIC18.32■□□□□ 0.52
CD40P25942 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.32■□□□□ 0.52
CD40P25942 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.32■□□□□ 0.52
CD40P25942 DUX4L16-201ENST00000555130 1264 ntBASIC18.32■□□□□ 0.52
CD40P25942 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CD40P25942 AC008175.2-201ENST00000612840 297 ntBASIC18.32■□□□□ 0.52
CD40P25942 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CD40P25942 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD40P25942 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD40P25942 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CD40P25942 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.32■□□□□ 0.52
CD40P25942 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.32■□□□□ 0.52
CD40P25942 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.32■□□□□ 0.52
CD40P25942 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD40P25942 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CD40P25942 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.31■□□□□ 0.52
CD40P25942 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.31■□□□□ 0.52
CD40P25942 CROCCP5-201ENST00000436658 830 ntBASIC18.31■□□□□ 0.52
CD40P25942 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CD40P25942 AC231657.2-201ENST00000624556 255 ntBASIC18.31■□□□□ 0.52
CD40P25942 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CD40P25942 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD40P25942 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD40P25942 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.31■□□□□ 0.52
CD40P25942 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
CD40P25942 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.3■□□□□ 0.52
CD40P25942 SLC7A5P2-201ENST00000553010 536 ntBASIC18.3■□□□□ 0.52
CD40P25942 SLC7A5P1-201ENST00000568957 537 ntBASIC18.3■□□□□ 0.52
CD40P25942 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.3■□□□□ 0.52
CD40P25942 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.3■□□□□ 0.52
CD40P25942 AC120498.10-201ENST00000621827 505 ntBASIC18.3■□□□□ 0.52
CD40P25942 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.3■□□□□ 0.52
CD40P25942 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CD40P25942 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
CD40P25942 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD40P25942 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.29■□□□□ 0.52
CD40P25942 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD40P25942 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.29■□□□□ 0.52
CD40P25942 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD40P25942 POU5F1P4-201ENST00000413175 1085 ntBASIC18.29■□□□□ 0.52
CD40P25942 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.29■□□□□ 0.52
CD40P25942 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.29■□□□□ 0.52
CD40P25942 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.29■□□□□ 0.52
CD40P25942 AC010536.3-201ENST00000620306 533 ntBASIC18.29■□□□□ 0.52
CD40P25942 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.29■□□□□ 0.52
CD40P25942 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD40P25942 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CD40P25942 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 MIR663A-201ENST00000385250 93 ntBASIC18.28■□□□□ 0.52
CD40P25942 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.28■□□□□ 0.52
CD40P25942 HLA-L-209ENST00000420110 1011 ntBASIC18.28■□□□□ 0.52
CD40P25942 AC007322.1-201ENST00000426983 750 ntBASIC18.28■□□□□ 0.52
CD40P25942 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms