Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YBR225WYBR225W 2703 nt3.93□□□□□ -1.78
MSH1P25846 FUN12YAL035W 3009 nt3.92□□□□□ -1.78
MSH1P25846 EBS1YDR206W 2655 nt3.92□□□□□ -1.78
MSH1P25846 VPS9YML097C 1356 nt3.92□□□□□ -1.78
MSH1P25846 ERP3YDL018C 678 nt3.92□□□□□ -1.78
MSH1P25846 YDR320W-BYDR320W-B 138 nt3.92□□□□□ -1.78
MSH1P25846 YFR010W-AYFR010W-A 189 nt3.92□□□□□ -1.78
MSH1P25846 ERJ5YFR041C 888 nt3.92□□□□□ -1.78
MSH1P25846 YJL175WYJL175W 513 nt3.92□□□□□ -1.78
MSH1P25846 YJR037WYJR037W 384 nt3.92□□□□□ -1.78
MSH1P25846 YLR050CYLR050C 486 nt3.92□□□□□ -1.78
MSH1P25846 BUR2YLR226W 1188 nt3.92□□□□□ -1.78
MSH1P25846 SHH3YMR118C 591 nt3.92□□□□□ -1.78
MSH1P25846 SPR2YOR214C 711 nt3.92□□□□□ -1.78
MSH1P25846 RPA43YOR340C 981 nt3.92□□□□□ -1.78
MSH1P25846 ARL3YPL051W 597 nt3.92□□□□□ -1.78
MSH1P25846 KAR4YCL055W 1008 nt3.92□□□□□ -1.78
MSH1P25846 TAF1YGR274C 3201 nt3.92□□□□□ -1.78
MSH1P25846 ESA1YOR244W 1338 nt3.92□□□□□ -1.78
MSH1P25846 RAD18YCR066W 1464 nt3.92□□□□□ -1.78
MSH1P25846 PIG2YIL045W 1617 nt3.92□□□□□ -1.78
MSH1P25846 NSP1YJL041W 2472 nt3.92□□□□□ -1.78
MSH1P25846 ROD1YOR018W 2514 nt3.91□□□□□ -1.78
MSH1P25846 KIN4YOR233W 2403 nt3.91□□□□□ -1.78
MSH1P25846 AHA1YDR214W 1053 nt3.91□□□□□ -1.78
MSH1P25846 SEC4YFL005W 648 nt3.91□□□□□ -1.78
MSH1P25846 CGR1YGL029W 363 nt3.91□□□□□ -1.78
MSH1P25846 DPH1YIL103W 1278 nt3.91□□□□□ -1.78
MSH1P25846 YKL162C-AYKL162C-A 153 nt3.91□□□□□ -1.78
MSH1P25846 COQ5YML110C 924 nt3.91□□□□□ -1.78
MSH1P25846 YNL050CYNL050C 813 nt3.91□□□□□ -1.78
MSH1P25846 ALG8YOR067C 1734 nt3.91□□□□□ -1.78
MSH1P25846 YOR203WYOR203W 354 nt3.91□□□□□ -1.78
MSH1P25846 MGE1YOR232W 687 nt3.91□□□□□ -1.78
MSH1P25846 USA1YML029W 2517 nt3.91□□□□□ -1.78
MSH1P25846 NGG1YDR176W 2109 nt3.9□□□□□ -1.79
MSH1P25846 NKP1YDR383C 717 nt3.9□□□□□ -1.79
MSH1P25846 MAM1YER106W 909 nt3.9□□□□□ -1.79
MSH1P25846 MRPL9YGR220C 810 nt3.9□□□□□ -1.79
MSH1P25846 DOG2YHR043C 741 nt3.9□□□□□ -1.79
MSH1P25846 YHR214C-EYHR214C-E 300 nt3.9□□□□□ -1.79
MSH1P25846 ANB1YJR047C 474 nt3.9□□□□□ -1.79
MSH1P25846 MBR1YKL093W 1020 nt3.9□□□□□ -1.79
MSH1P25846 RCN1YKL159C 636 nt3.9□□□□□ -1.79
MSH1P25846 YAR070CYAR070C 300 nt3.9□□□□□ -1.79
MSH1P25846 YOR152CYOR152C 771 nt3.9□□□□□ -1.79
MSH1P25846 POL30YBR088C 777 nt3.9□□□□□ -1.79
MSH1P25846 YBR090CYBR090C 369 nt3.9□□□□□ -1.79
MSH1P25846 POP7YBR167C 423 nt3.9□□□□□ -1.79
MSH1P25846 YPD1YDL235C 504 nt3.89□□□□□ -1.79
MSH1P25846 TGL2YDR058C 981 nt3.89□□□□□ -1.79
MSH1P25846 YDR133CYDR133C 336 nt3.89□□□□□ -1.79
MSH1P25846 MFA1YDR461W 111 nt3.89□□□□□ -1.79
MSH1P25846 YGR115CYGR115C 780 nt3.89□□□□□ -1.79
MSH1P25846 YHL002C-AYHL002C-A 489 nt3.89□□□□□ -1.79
MSH1P25846 RIM11YMR139W 1113 nt3.89□□□□□ -1.79
MSH1P25846 YNR025CYNR025C 360 nt3.89□□□□□ -1.79
MSH1P25846 RIB4YOL143C 510 nt3.89□□□□□ -1.79
MSH1P25846 ATG26YLR189C 3597 nt3.89□□□□□ -1.79
MSH1P25846 FRE4YNR060W 2160 nt3.89□□□□□ -1.79
MSH1P25846 SLM2YNL047C 1971 nt3.89□□□□□ -1.79
MSH1P25846 ESC2YDR363W 1371 nt3.89□□□□□ -1.79
MSH1P25846 EXO70YJL085W 1872 nt3.88□□□□□ -1.79
MSH1P25846 SEC6YIL068C 2418 nt3.88□□□□□ -1.79
MSH1P25846 YGL109WYGL109W 324 nt3.88□□□□□ -1.79
MSH1P25846 TAD1YGL243W 1203 nt3.88□□□□□ -1.79
MSH1P25846 YBL028CYBL028C 321 nt3.88□□□□□ -1.79
MSH1P25846 RLP7YNL002C 969 nt3.88□□□□□ -1.79
MSH1P25846 RXT2YBR095C 1293 nt3.88□□□□□ -1.79
MSH1P25846 ERT1YBR239C 1590 nt3.88□□□□□ -1.79
MSH1P25846 CST9YLR394W 1449 nt3.87□□□□□ -1.79
MSH1P25846 YGR027W-BYGR027W-B 5268 nt3.87□□□□□ -1.79
MSH1P25846 YLR227W-BYLR227W-B 5268 nt3.87□□□□□ -1.79
MSH1P25846 YPR158C-DYPR158C-D 5268 nt3.87□□□□□ -1.79
MSH1P25846 FLO10YKR102W 3510 nt3.87□□□□□ -1.79
MSH1P25846 PHM6YDR281C 315 nt3.87□□□□□ -1.79
MSH1P25846 SPT2YER161C 1002 nt3.87□□□□□ -1.79
MSH1P25846 OTU1YFL044C 906 nt3.87□□□□□ -1.79
MSH1P25846 YPT52YKR014C 705 nt3.87□□□□□ -1.79
MSH1P25846 YPT7YML001W 627 nt3.87□□□□□ -1.79
MSH1P25846 YAP7YOL028C 738 nt3.87□□□□□ -1.79
MSH1P25846 ERG5YMR015C 1617 nt3.87□□□□□ -1.79
MSH1P25846 SRP1YNL189W 1629 nt3.87□□□□□ -1.79
MSH1P25846 LTV1YKL143W 1392 nt3.87□□□□□ -1.79
MSH1P25846 AIP1YMR092C 1848 nt3.86□□□□□ -1.79
MSH1P25846 YDR089WYDR089W 2610 nt3.86□□□□□ -1.79
MSH1P25846 snR68snR68 136 nt3.86□□□□□ -1.79
MSH1P25846 CWC2YDL209C 1020 nt3.86□□□□□ -1.79
MSH1P25846 YDR203WYDR203W 318 nt3.86□□□□□ -1.79
MSH1P25846 UPF3YGR072W 1164 nt3.86□□□□□ -1.79
MSH1P25846 CDC8YJR057W 651 nt3.86□□□□□ -1.79
MSH1P25846 YNL276CYNL276C 396 nt3.86□□□□□ -1.79
MSH1P25846 YNR062CYNR062C 984 nt3.86□□□□□ -1.79
MSH1P25846 snR17asnR17a 333 nt3.86□□□□□ -1.79
MSH1P25846 MRH4YGL064C 1686 nt3.86□□□□□ -1.79
MSH1P25846 YJL049WYJL049W 1353 nt3.86□□□□□ -1.79
MSH1P25846 ITT1YML068W 1395 nt3.86□□□□□ -1.79
MSH1P25846 HEF3YNL014W 3135 nt3.86□□□□□ -1.79
MSH1P25846 CDC37YDR168W 1521 nt3.85□□□□□ -1.79
MSH1P25846 COBQ0105 1158 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 24.2 ms