Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
ATF4P18848 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATF4P18848 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ATF4P18848 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ATF4P18848 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 RARRES2P1-201ENST00000474487 481 ntBASIC17.6■□□□□ 0.41
ATF4P18848 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATF4P18848 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 AC090877.2-201ENST00000558441 1738 ntBASIC17.6■□□□□ 0.41
ATF4P18848 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
ATF4P18848 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 AC139530.1-201ENST00000575312 1977 ntBASIC17.6■□□□□ 0.41
ATF4P18848 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATF4P18848 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.6■□□□□ 0.41
ATF4P18848 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ATF4P18848 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATF4P18848 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATF4P18848 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATF4P18848 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.59■□□□□ 0.41
ATF4P18848 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.59■□□□□ 0.41
ATF4P18848 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.59■□□□□ 0.41
ATF4P18848 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATF4P18848 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATF4P18848 AC018445.3-201ENST00000624177 1945 ntBASIC17.59■□□□□ 0.41
ATF4P18848 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ATF4P18848 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF4P18848 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
ATF4P18848 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATF4P18848 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.58■□□□□ 0.41
ATF4P18848 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ATF4P18848 DUX4L9-201ENST00000449051 1259 ntBASIC17.58■□□□□ 0.4
ATF4P18848 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF4P18848 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.58■□□□□ 0.4
ATF4P18848 AC087393.1-201ENST00000582896 145 ntBASIC17.58■□□□□ 0.4
ATF4P18848 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATF4P18848 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.4
ATF4P18848 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
ATF4P18848 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
ATF4P18848 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.58■□□□□ 0.4
ATF4P18848 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 HCG11-201ENST00000411553 5696 ntBASIC17.58■□□□□ 0.4
ATF4P18848 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 AC005082.1-201ENST00000413042 2259 ntBASIC17.58■□□□□ 0.4
ATF4P18848 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATF4P18848 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATF4P18848 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.57■□□□□ 0.4
ATF4P18848 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
ATF4P18848 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ATF4P18848 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF4P18848 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.57■□□□□ 0.4
ATF4P18848 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATF4P18848 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF4P18848 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF4P18848 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATF4P18848 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.56■□□□□ 0.4
ATF4P18848 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF4P18848 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATF4P18848 SPCS2P3-201ENST00000500401 656 ntBASIC17.56■□□□□ 0.4
ATF4P18848 DUX4L18-201ENST00000553347 1267 ntBASIC17.56■□□□□ 0.4
ATF4P18848 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms