Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.32■□□□□ 0.68
FREM3P0C091 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
FREM3P0C091 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FREM3P0C091 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.32■□□□□ 0.68
FREM3P0C091 DUX4L16-201ENST00000555130 1264 ntBASIC19.32■□□□□ 0.68
FREM3P0C091 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FREM3P0C091 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.31■□□□□ 0.68
FREM3P0C091 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FREM3P0C091 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.31■□□□□ 0.68
FREM3P0C091 AC138907.5-202ENST00000569484 235 ntBASIC19.31■□□□□ 0.68
FREM3P0C091 UBE2DNL-204ENST00000602536 740 ntBASIC19.31■□□□□ 0.68
FREM3P0C091 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
FREM3P0C091 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.31■□□□□ 0.68
FREM3P0C091 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.31■□□□□ 0.68
FREM3P0C091 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.31■□□□□ 0.68
FREM3P0C091 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.31■□□□□ 0.68
FREM3P0C091 MFSD11-216ENST00000590393 1141 ntBASIC19.31■□□□□ 0.68
FREM3P0C091 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
FREM3P0C091 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.31■□□□□ 0.68
FREM3P0C091 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FREM3P0C091 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.3■□□□□ 0.68
FREM3P0C091 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FREM3P0C091 FAM99A-202ENST00000538190 1989 ntBASIC19.3■□□□□ 0.68
FREM3P0C091 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 AC026185.1-201ENST00000445748 174 ntBASIC19.3■□□□□ 0.68
FREM3P0C091 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 AC079140.4-201ENST00000507448 529 ntBASIC19.3■□□□□ 0.68
FREM3P0C091 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.3■□□□□ 0.68
FREM3P0C091 RAP2CP1-201ENST00000605103 478 ntBASIC19.3■□□□□ 0.68
FREM3P0C091 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
FREM3P0C091 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.29■□□□□ 0.68
FREM3P0C091 KRT18P11-201ENST00000435214 1283 ntBASIC19.29■□□□□ 0.68
FREM3P0C091 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.29■□□□□ 0.68
FREM3P0C091 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.29■□□□□ 0.68
FREM3P0C091 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.29■□□□□ 0.68
FREM3P0C091 AC010542.4-201ENST00000563151 1910 ntBASIC19.29■□□□□ 0.68
FREM3P0C091 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FREM3P0C091 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.28■□□□□ 0.68
FREM3P0C091 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.28■□□□□ 0.68
FREM3P0C091 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.28■□□□□ 0.68
FREM3P0C091 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.28■□□□□ 0.68
FREM3P0C091 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.28■□□□□ 0.68
FREM3P0C091 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM3P0C091 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.28■□□□□ 0.68
FREM3P0C091 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
FREM3P0C091 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.28■□□□□ 0.68
FREM3P0C091 EEF1DP3-203ENST00000566025 782 ntBASIC19.28■□□□□ 0.68
FREM3P0C091 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.28■□□□□ 0.68
FREM3P0C091 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FREM3P0C091 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FREM3P0C091 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FREM3P0C091 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM3P0C091 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM3P0C091 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FREM3P0C091 AC006015.1-201ENST00000429970 570 ntBASIC19.27■□□□□ 0.68
FREM3P0C091 CDCA4P2-201ENST00000441182 718 ntBASIC19.27■□□□□ 0.68
FREM3P0C091 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
FREM3P0C091 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FREM3P0C091 MIR663A-201ENST00000385250 93 ntBASIC19.27■□□□□ 0.67
FREM3P0C091 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.27■□□□□ 0.67
FREM3P0C091 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.27■□□□□ 0.67
FREM3P0C091 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
FREM3P0C091 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM3P0C091 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms