Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.14■■□□□ 1.45
HOXC6P09630 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HOXC6P09630 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HOXC6P09630 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
HOXC6P09630 RPS2P52-201ENST00000469610 820 ntBASIC24.13■■□□□ 1.45
HOXC6P09630 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HOXC6P09630 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HOXC6P09630 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HOXC6P09630 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
HOXC6P09630 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.12■■□□□ 1.45
HOXC6P09630 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.12■■□□□ 1.45
HOXC6P09630 KRT16P2-201ENST00000414673 1423 ntBASIC24.12■■□□□ 1.45
HOXC6P09630 RBM17P2-201ENST00000616397 1405 ntBASIC24.12■■□□□ 1.45
HOXC6P09630 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.12■■□□□ 1.45
HOXC6P09630 ESRRAP1-201ENST00000400596 1257 ntBASIC24.12■■□□□ 1.45
HOXC6P09630 DUSP5P2-201ENST00000426873 1033 ntBASIC24.12■■□□□ 1.45
HOXC6P09630 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.12■■□□□ 1.45
HOXC6P09630 AC091874.3-201ENST00000512672 1195 ntBASIC24.12■■□□□ 1.45
HOXC6P09630 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.12■■□□□ 1.45
HOXC6P09630 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
HOXC6P09630 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HOXC6P09630 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.12■■□□□ 1.45
HOXC6P09630 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.11■■□□□ 1.45
HOXC6P09630 AC010980.2-201ENST00000587099 1412 ntBASIC24.11■■□□□ 1.45
HOXC6P09630 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
HOXC6P09630 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HOXC6P09630 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
HOXC6P09630 GCSHP5-201ENST00000443090 522 ntBASIC24.11■■□□□ 1.45
HOXC6P09630 AL591742.1-201ENST00000604433 565 ntBASIC24.11■■□□□ 1.45
HOXC6P09630 AC243732.1-201ENST00000612648 864 ntBASIC24.11■■□□□ 1.45
HOXC6P09630 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.11■■□□□ 1.45
HOXC6P09630 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.11■■□□□ 1.45
HOXC6P09630 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
HOXC6P09630 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HOXC6P09630 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HOXC6P09630 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HOXC6P09630 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.11■■□□□ 1.45
HOXC6P09630 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.1■■□□□ 1.45
HOXC6P09630 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.1■■□□□ 1.45
HOXC6P09630 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.1■■□□□ 1.45
HOXC6P09630 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.1■■□□□ 1.45
HOXC6P09630 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.1■■□□□ 1.45
HOXC6P09630 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.1■■□□□ 1.45
HOXC6P09630 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.1■■□□□ 1.45
HOXC6P09630 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HOXC6P09630 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
HOXC6P09630 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
HOXC6P09630 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.09■■□□□ 1.45
HOXC6P09630 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.09■■□□□ 1.45
HOXC6P09630 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.09■■□□□ 1.45
HOXC6P09630 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.09■■□□□ 1.45
HOXC6P09630 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HOXC6P09630 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
HOXC6P09630 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HOXC6P09630 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
HOXC6P09630 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HOXC6P09630 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.08■■□□□ 1.45
HOXC6P09630 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
HOXC6P09630 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.08■■□□□ 1.45
HOXC6P09630 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HOXC6P09630 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
HOXC6P09630 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
HOXC6P09630 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.08■■□□□ 1.44
HOXC6P09630 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.07■■□□□ 1.44
HOXC6P09630 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HOXC6P09630 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.07■■□□□ 1.44
HOXC6P09630 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.07■■□□□ 1.44
HOXC6P09630 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HOXC6P09630 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HOXC6P09630 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
HOXC6P09630 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.07■■□□□ 1.44
HOXC6P09630 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.07■■□□□ 1.44
HOXC6P09630 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.07■■□□□ 1.44
HOXC6P09630 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.07■■□□□ 1.44
HOXC6P09630 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.07■■□□□ 1.44
HOXC6P09630 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.07■■□□□ 1.44
HOXC6P09630 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HOXC6P09630 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HOXC6P09630 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.07■■□□□ 1.44
HOXC6P09630 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.06■■□□□ 1.44
HOXC6P09630 AC137767.1-201ENST00000602918 1920 ntBASIC24.06■■□□□ 1.44
HOXC6P09630 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
HOXC6P09630 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.06■■□□□ 1.44
HOXC6P09630 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
HOXC6P09630 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
HOXC6P09630 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HOXC6P09630 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms