Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 PKD1P6-201ENST00000343738 4769 ntBASIC19.52■□□□□ 0.72
THBS1P07996 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
THBS1P07996 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.52■□□□□ 0.72
THBS1P07996 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.52■□□□□ 0.72
THBS1P07996 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS1P07996 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.52■□□□□ 0.72
THBS1P07996 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.52■□□□□ 0.71
THBS1P07996 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.52■□□□□ 0.71
THBS1P07996 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
THBS1P07996 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
THBS1P07996 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
THBS1P07996 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.51■□□□□ 0.71
THBS1P07996 MIR572-201ENST00000384983 95 ntBASIC19.51■□□□□ 0.71
THBS1P07996 AC026271.2-201ENST00000428091 497 ntBASIC19.51■□□□□ 0.71
THBS1P07996 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
THBS1P07996 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.51■□□□□ 0.71
THBS1P07996 AF213884.3-201ENST00000563833 479 ntBASIC19.51■□□□□ 0.71
THBS1P07996 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.51■□□□□ 0.71
THBS1P07996 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.51■□□□□ 0.71
THBS1P07996 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.51■□□□□ 0.71
THBS1P07996 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.51■□□□□ 0.71
THBS1P07996 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS1P07996 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
THBS1P07996 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.51■□□□□ 0.71
THBS1P07996 AL024507.2-201ENST00000606070 2574 ntBASIC19.5■□□□□ 0.71
THBS1P07996 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.5■□□□□ 0.71
THBS1P07996 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
THBS1P07996 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 AC055733.4-201ENST00000638462 1354 ntBASIC19.5■□□□□ 0.71
THBS1P07996 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
THBS1P07996 RARRES2P6-201ENST00000567333 442 ntBASIC19.5■□□□□ 0.71
THBS1P07996 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
THBS1P07996 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS1P07996 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
THBS1P07996 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.49■□□□□ 0.71
THBS1P07996 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.49■□□□□ 0.71
THBS1P07996 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
THBS1P07996 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.49■□□□□ 0.71
THBS1P07996 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.49■□□□□ 0.71
THBS1P07996 AL136967.2-201ENST00000623968 743 ntBASIC19.49■□□□□ 0.71
THBS1P07996 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS1P07996 BX005040.4-201ENST00000637145 1518 ntBASIC19.49■□□□□ 0.71
THBS1P07996 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.49■□□□□ 0.71
THBS1P07996 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.49■□□□□ 0.71
THBS1P07996 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
THBS1P07996 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
THBS1P07996 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.48■□□□□ 0.71
THBS1P07996 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.48■□□□□ 0.71
THBS1P07996 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.48■□□□□ 0.71
THBS1P07996 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 AF106564.1-201ENST00000607058 2553 ntBASIC19.48■□□□□ 0.71
THBS1P07996 AC005224.4-201ENST00000583262 1652 ntBASIC19.48■□□□□ 0.71
THBS1P07996 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
THBS1P07996 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS1P07996 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
THBS1P07996 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.47■□□□□ 0.71
THBS1P07996 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms