Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.43□□□□□ -0.26
APOBP04114 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
APOBP04114 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOBP04114 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.43□□□□□ -0.26
APOBP04114 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
APOBP04114 KRT18P21-201ENST00000515767 1272 ntBASIC13.43□□□□□ -0.26
APOBP04114 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.43□□□□□ -0.26
APOBP04114 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.43□□□□□ -0.26
APOBP04114 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOBP04114 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.42□□□□□ -0.26
APOBP04114 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
APOBP04114 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.42□□□□□ -0.26
APOBP04114 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 AC097493.4-201ENST00000641197 219 ntBASIC13.42□□□□□ -0.26
APOBP04114 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOBP04114 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.42□□□□□ -0.26
APOBP04114 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.42□□□□□ -0.26
APOBP04114 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
APOBP04114 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC13.42□□□□□ -0.26
APOBP04114 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
APOBP04114 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
APOBP04114 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.42□□□□□ -0.26
APOBP04114 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.42□□□□□ -0.26
APOBP04114 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 ABCB10P4-201ENST00000566803 2184 ntBASIC13.42□□□□□ -0.26
APOBP04114 AL139125.2-201ENST00000623134 1869 ntBASIC13.42□□□□□ -0.26
APOBP04114 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
APOBP04114 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOBP04114 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.41□□□□□ -0.26
APOBP04114 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOBP04114 AP004607.7-201ENST00000527152 1677 ntBASIC13.41□□□□□ -0.26
APOBP04114 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOBP04114 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.41□□□□□ -0.26
APOBP04114 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC13.41□□□□□ -0.26
APOBP04114 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.4□□□□□ -0.26
APOBP04114 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.4□□□□□ -0.26
APOBP04114 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.4□□□□□ -0.26
APOBP04114 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
APOBP04114 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.4□□□□□ -0.26
APOBP04114 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOBP04114 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.4□□□□□ -0.27
APOBP04114 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBP04114 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOBP04114 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
APOBP04114 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.39□□□□□ -0.27
APOBP04114 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
APOBP04114 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOBP04114 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.39□□□□□ -0.27
APOBP04114 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms