Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV3P03979 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRGV3P03979 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV3P03979 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRGV3P03979 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV3P03979 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV3P03979 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.65■□□□□ 0.26
TRGV3P03979 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
TRGV3P03979 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.65■□□□□ 0.26
TRGV3P03979 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV3P03979 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV3P03979 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV3P03979 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV3P03979 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRGV3P03979 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV3P03979 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.65■□□□□ 0.26
TRGV3P03979 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRGV3P03979 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRGV3P03979 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRGV3P03979 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV3P03979 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV3P03979 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRGV3P03979 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.64■□□□□ 0.25
TRGV3P03979 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRGV3P03979 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 AC079140.4-201ENST00000507448 529 ntBASIC16.64■□□□□ 0.25
TRGV3P03979 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.64■□□□□ 0.25
TRGV3P03979 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRGV3P03979 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV3P03979 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRGV3P03979 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRGV3P03979 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV3P03979 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRGV3P03979 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.63■□□□□ 0.25
TRGV3P03979 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.63■□□□□ 0.25
TRGV3P03979 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TRGV3P03979 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRGV3P03979 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV3P03979 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 AC055733.4-201ENST00000638462 1354 ntBASIC16.63■□□□□ 0.25
TRGV3P03979 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRGV3P03979 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV3P03979 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRGV3P03979 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRGV3P03979 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRGV3P03979 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRGV3P03979 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 MIR935-201ENST00000401179 91 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 AC097381.1-201ENST00000429019 1296 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.62■□□□□ 0.25
TRGV3P03979 RARRES2P6-201ENST00000567333 442 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 CCDC92B-201ENST00000575506 885 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 AC104564.3-201ENST00000582367 638 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.62■□□□□ 0.25
TRGV3P03979 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.62■□□□□ 0.25
TRGV3P03979 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 AC026471.6-201ENST00000622954 1905 ntBASIC16.62■□□□□ 0.25
TRGV3P03979 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV3P03979 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV3P03979 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV3P03979 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms