Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.56■□□□□ 0.24
TOMM40O96008 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TOMM40O96008 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.56■□□□□ 0.24
TOMM40O96008 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
TOMM40O96008 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.55■□□□□ 0.24
TOMM40O96008 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TOMM40O96008 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TOMM40O96008 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TOMM40O96008 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.55■□□□□ 0.24
TOMM40O96008 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
TOMM40O96008 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TOMM40O96008 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TOMM40O96008 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TOMM40O96008 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.55■□□□□ 0.24
TOMM40O96008 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.54■□□□□ 0.24
TOMM40O96008 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.54■□□□□ 0.24
TOMM40O96008 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TOMM40O96008 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TOMM40O96008 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TOMM40O96008 SLC47A1P1-202ENST00000449666 945 ntBASIC16.54■□□□□ 0.24
TOMM40O96008 AC131281.2-201ENST00000520478 145 ntBASIC16.54■□□□□ 0.24
TOMM40O96008 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TOMM40O96008 FEM1AP4-201ENST00000443167 1987 ntBASIC16.54■□□□□ 0.24
TOMM40O96008 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TOMM40O96008 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.54■□□□□ 0.24
TOMM40O96008 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TOMM40O96008 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TOMM40O96008 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TOMM40O96008 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 AP004607.7-201ENST00000527152 1677 ntBASIC16.53■□□□□ 0.24
TOMM40O96008 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.53■□□□□ 0.24
TOMM40O96008 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TOMM40O96008 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.53■□□□□ 0.24
TOMM40O96008 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TOMM40O96008 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TOMM40O96008 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.53■□□□□ 0.24
TOMM40O96008 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TOMM40O96008 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.53■□□□□ 0.24
TOMM40O96008 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.52■□□□□ 0.24
TOMM40O96008 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TOMM40O96008 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.52■□□□□ 0.24
TOMM40O96008 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOMM40O96008 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.52■□□□□ 0.23
TOMM40O96008 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOMM40O96008 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOMM40O96008 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TOMM40O96008 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.52■□□□□ 0.23
TOMM40O96008 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.51■□□□□ 0.23
TOMM40O96008 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TOMM40O96008 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TOMM40O96008 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms