Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ABCA1O95477 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ABCA1O95477 ANOS2P-203ENST00000472227 1816 ntBASIC17.72■□□□□ 0.43
ABCA1O95477 AC098590.1-201ENST00000468126 897 ntBASIC17.72■□□□□ 0.43
ABCA1O95477 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ABCA1O95477 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ABCA1O95477 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ABCA1O95477 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ABCA1O95477 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.71■□□□□ 0.43
ABCA1O95477 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ABCA1O95477 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.71■□□□□ 0.42
ABCA1O95477 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ABCA1O95477 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.71■□□□□ 0.42
ABCA1O95477 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.71■□□□□ 0.42
ABCA1O95477 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.7■□□□□ 0.42
ABCA1O95477 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.7■□□□□ 0.42
ABCA1O95477 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.7■□□□□ 0.42
ABCA1O95477 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ABCA1O95477 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.7■□□□□ 0.42
ABCA1O95477 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ABCA1O95477 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
ABCA1O95477 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ABCA1O95477 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ABCA1O95477 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ABCA1O95477 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.7■□□□□ 0.42
ABCA1O95477 GCSHP5-201ENST00000443090 522 ntBASIC17.7■□□□□ 0.42
ABCA1O95477 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.7■□□□□ 0.42
ABCA1O95477 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.7■□□□□ 0.42
ABCA1O95477 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.7■□□□□ 0.42
ABCA1O95477 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.7■□□□□ 0.42
ABCA1O95477 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ABCA1O95477 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.7■□□□□ 0.42
ABCA1O95477 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ABCA1O95477 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.69■□□□□ 0.42
ABCA1O95477 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.69■□□□□ 0.42
ABCA1O95477 AC016405.3-201ENST00000607710 860 ntBASIC17.69■□□□□ 0.42
ABCA1O95477 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.69■□□□□ 0.42
ABCA1O95477 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.69■□□□□ 0.42
ABCA1O95477 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.69■□□□□ 0.42
ABCA1O95477 AC142381.4-202ENST00000563973 229 ntBASIC17.69■□□□□ 0.42
ABCA1O95477 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
ABCA1O95477 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCA1O95477 LINC01960-201ENST00000563759 1884 ntBASIC17.69■□□□□ 0.42
ABCA1O95477 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.69■□□□□ 0.42
ABCA1O95477 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ABCA1O95477 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 KRT18P29-201ENST00000397031 1267 ntBASIC17.68■□□□□ 0.42
ABCA1O95477 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.68■□□□□ 0.42
ABCA1O95477 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 AC092068.2-201ENST00000590491 1708 ntBASIC17.68■□□□□ 0.42
ABCA1O95477 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ABCA1O95477 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ABCA1O95477 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ABCA1O95477 CYP2T1P-201ENST00000432607 1285 ntBASIC17.68■□□□□ 0.42
ABCA1O95477 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
ABCA1O95477 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.68■□□□□ 0.42
ABCA1O95477 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCA1O95477 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCA1O95477 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ABCA1O95477 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms