Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 AC105265.2-201ENST00000467189 838 ntBASIC24.69■■□□□ 1.54
CTDNEP1O95476 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.69■■□□□ 1.54
CTDNEP1O95476 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CTDNEP1O95476 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.68■■□□□ 1.54
CTDNEP1O95476 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.68■■□□□ 1.54
CTDNEP1O95476 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CTDNEP1O95476 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CTDNEP1O95476 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 MIR6084-201ENST00000622012 110 ntBASIC24.67■■□□□ 1.54
CTDNEP1O95476 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CTDNEP1O95476 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTDNEP1O95476 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CTDNEP1O95476 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.67■■□□□ 1.54
CTDNEP1O95476 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.66■■□□□ 1.54
CTDNEP1O95476 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.66■■□□□ 1.54
CTDNEP1O95476 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
CTDNEP1O95476 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.66■■□□□ 1.54
CTDNEP1O95476 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CTDNEP1O95476 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTDNEP1O95476 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CTDNEP1O95476 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.65■■□□□ 1.54
CTDNEP1O95476 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTDNEP1O95476 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTDNEP1O95476 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTDNEP1O95476 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CTDNEP1O95476 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CTDNEP1O95476 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CTDNEP1O95476 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.64■■□□□ 1.54
CTDNEP1O95476 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.64■■□□□ 1.54
CTDNEP1O95476 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.64■■□□□ 1.54
CTDNEP1O95476 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.64■■□□□ 1.54
CTDNEP1O95476 AL354811.1-201ENST00000610286 706 ntBASIC24.64■■□□□ 1.54
CTDNEP1O95476 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CTDNEP1O95476 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CTDNEP1O95476 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 IRS3P-201ENST00000223076 1006 ntBASIC24.62■■□□□ 1.53
CTDNEP1O95476 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.62■■□□□ 1.53
CTDNEP1O95476 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.62■■□□□ 1.53
CTDNEP1O95476 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CTDNEP1O95476 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.61■■□□□ 1.53
CTDNEP1O95476 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CTDNEP1O95476 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CTDNEP1O95476 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.61■■□□□ 1.53
CTDNEP1O95476 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CTDNEP1O95476 AL358852.1-201ENST00000623174 1268 ntBASIC24.61■■□□□ 1.53
CTDNEP1O95476 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.61■■□□□ 1.53
CTDNEP1O95476 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CTDNEP1O95476 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CTDNEP1O95476 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
CTDNEP1O95476 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CTDNEP1O95476 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CTDNEP1O95476 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CTDNEP1O95476 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CTDNEP1O95476 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CTDNEP1O95476 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms