Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF253O75346 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF253O75346 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ZNF253O75346 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF253O75346 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF253O75346 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF253O75346 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZNF253O75346 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF253O75346 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF253O75346 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF253O75346 AL117332.1-201ENST00000622628 974 ntBASIC16.42■□□□□ 0.22
ZNF253O75346 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZNF253O75346 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF253O75346 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF253O75346 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF253O75346 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF253O75346 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF253O75346 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ZNF253O75346 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF253O75346 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 AC068587.7-201ENST00000641602 218 ntBASIC16.41■□□□□ 0.22
ZNF253O75346 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF253O75346 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF253O75346 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF253O75346 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ZNF253O75346 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF253O75346 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF253O75346 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF253O75346 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF253O75346 AC079089.2-201ENST00000531211 1277 ntBASIC16.4■□□□□ 0.22
ZNF253O75346 MIR6724-1-201ENST00000616420 92 ntBASIC16.4■□□□□ 0.22
ZNF253O75346 MIR6724-2-201ENST00000616483 92 ntBASIC16.4■□□□□ 0.22
ZNF253O75346 MIR6724-4-201ENST00000617390 92 ntBASIC16.4■□□□□ 0.22
ZNF253O75346 MIR6724-3-201ENST00000622482 92 ntBASIC16.4■□□□□ 0.22
ZNF253O75346 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF253O75346 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
ZNF253O75346 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF253O75346 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF253O75346 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.39■□□□□ 0.21
ZNF253O75346 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
ZNF253O75346 AC239859.2-201ENST00000444165 318 ntBASIC16.39■□□□□ 0.21
ZNF253O75346 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF253O75346 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF253O75346 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF253O75346 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF253O75346 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ZNF253O75346 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF253O75346 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF253O75346 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF253O75346 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms