Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNOT3O75175 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT3O75175 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT3O75175 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT3O75175 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNOT3O75175 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CNOT3O75175 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CNOT3O75175 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.45■□□□□ 0.86
CNOT3O75175 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.45■□□□□ 0.86
CNOT3O75175 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.45■□□□□ 0.86
CNOT3O75175 AL137784.2-201ENST00000607332 1000 ntBASIC20.45■□□□□ 0.86
CNOT3O75175 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT3O75175 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT3O75175 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT3O75175 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CNOT3O75175 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CNOT3O75175 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT3O75175 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 AC242852.2-201ENST00000615738 1807 ntBASIC20.44■□□□□ 0.86
CNOT3O75175 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNOT3O75175 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.44■□□□□ 0.86
CNOT3O75175 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.44■□□□□ 0.86
CNOT3O75175 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.44■□□□□ 0.86
CNOT3O75175 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.44■□□□□ 0.86
CNOT3O75175 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNOT3O75175 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT3O75175 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNOT3O75175 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.43■□□□□ 0.86
CNOT3O75175 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CNOT3O75175 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CNOT3O75175 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT3O75175 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CNOT3O75175 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CNOT3O75175 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT3O75175 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.43■□□□□ 0.86
CNOT3O75175 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT3O75175 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CNOT3O75175 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CNOT3O75175 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNOT3O75175 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.42■□□□□ 0.86
CNOT3O75175 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CNOT3O75175 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.42■□□□□ 0.86
CNOT3O75175 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.42■□□□□ 0.86
CNOT3O75175 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.42■□□□□ 0.86
CNOT3O75175 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT3O75175 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CNOT3O75175 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT3O75175 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 AC004911.1-201ENST00000416316 871 ntBASIC20.41■□□□□ 0.86
CNOT3O75175 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.41■□□□□ 0.86
CNOT3O75175 RARRES2P11-201ENST00000635158 484 ntBASIC20.41■□□□□ 0.86
CNOT3O75175 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT3O75175 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms