Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE3O75131 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE3O75131 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE3O75131 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE3O75131 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE3O75131 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE3O75131 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE3O75131 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE3O75131 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.29■□□□□ 0.84
CPNE3O75131 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
CPNE3O75131 AP001160.3-201ENST00000601484 763 ntBASIC20.29■□□□□ 0.84
CPNE3O75131 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.29■□□□□ 0.84
CPNE3O75131 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE3O75131 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE3O75131 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE3O75131 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE3O75131 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CPNE3O75131 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CPNE3O75131 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE3O75131 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE3O75131 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE3O75131 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE3O75131 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.28■□□□□ 0.84
CPNE3O75131 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE3O75131 UBE2DNL-204ENST00000602536 740 ntBASIC20.28■□□□□ 0.84
CPNE3O75131 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE3O75131 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE3O75131 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE3O75131 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CPNE3O75131 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE3O75131 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE3O75131 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE3O75131 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE3O75131 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE3O75131 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.27■□□□□ 0.84
CPNE3O75131 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE3O75131 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE3O75131 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE3O75131 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE3O75131 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE3O75131 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE3O75131 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE3O75131 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPNE3O75131 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 CROCCP5-201ENST00000436658 830 ntBASIC20.26■□□□□ 0.83
CPNE3O75131 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CPNE3O75131 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 AP006587.3-201ENST00000525742 1516 ntBASIC20.26■□□□□ 0.83
CPNE3O75131 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE3O75131 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE3O75131 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE3O75131 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE3O75131 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE3O75131 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE3O75131 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE3O75131 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE3O75131 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPNE3O75131 MIR663A-201ENST00000385250 93 ntBASIC20.25■□□□□ 0.83
CPNE3O75131 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE3O75131 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE3O75131 AC010141.2-201ENST00000452426 721 ntBASIC20.25■□□□□ 0.83
CPNE3O75131 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE3O75131 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE3O75131 AC138907.5-202ENST00000569484 235 ntBASIC20.25■□□□□ 0.83
CPNE3O75131 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE3O75131 MYCNOS-205ENST00000641950 531 ntBASIC20.25■□□□□ 0.83
CPNE3O75131 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE3O75131 AC137767.1-201ENST00000602918 1920 ntBASIC20.25■□□□□ 0.83
CPNE3O75131 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPNE3O75131 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE3O75131 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
CPNE3O75131 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE3O75131 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE3O75131 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE3O75131 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CPNE3O75131 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE3O75131 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE3O75131 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms