Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.86■□□□□ 0.93
VEGFDO43915 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
VEGFDO43915 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.86■□□□□ 0.93
VEGFDO43915 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 KRT18P11-201ENST00000435214 1283 ntBASIC20.86■□□□□ 0.93
VEGFDO43915 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.86■□□□□ 0.93
VEGFDO43915 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.86■□□□□ 0.93
VEGFDO43915 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.86■□□□□ 0.93
VEGFDO43915 AC008175.2-201ENST00000612840 297 ntBASIC20.86■□□□□ 0.93
VEGFDO43915 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.86■□□□□ 0.93
VEGFDO43915 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VEGFDO43915 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
VEGFDO43915 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.85■□□□□ 0.93
VEGFDO43915 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.85■□□□□ 0.93
VEGFDO43915 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
VEGFDO43915 AL137784.2-201ENST00000607332 1000 ntBASIC20.85■□□□□ 0.93
VEGFDO43915 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.85■□□□□ 0.93
VEGFDO43915 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VEGFDO43915 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VEGFDO43915 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 POU5F1P4-201ENST00000413175 1085 ntBASIC20.84■□□□□ 0.93
VEGFDO43915 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.84■□□□□ 0.93
VEGFDO43915 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.84■□□□□ 0.93
VEGFDO43915 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.84■□□□□ 0.93
VEGFDO43915 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 IKBKGP1-201ENST00000612193 1073 ntBASIC20.84■□□□□ 0.93
VEGFDO43915 AC092437.1-201ENST00000624794 1048 ntBASIC20.84■□□□□ 0.93
VEGFDO43915 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VEGFDO43915 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.83■□□□□ 0.93
VEGFDO43915 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.83■□□□□ 0.93
VEGFDO43915 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.83■□□□□ 0.93
VEGFDO43915 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VEGFDO43915 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VEGFDO43915 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VEGFDO43915 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VEGFDO43915 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VEGFDO43915 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VEGFDO43915 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.83■□□□□ 0.92
VEGFDO43915 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VEGFDO43915 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
VEGFDO43915 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.82■□□□□ 0.92
VEGFDO43915 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VEGFDO43915 EP400NL-214ENST00000641289 2402 ntBASIC20.82■□□□□ 0.92
VEGFDO43915 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.82■□□□□ 0.92
VEGFDO43915 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VEGFDO43915 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.82■□□□□ 0.92
VEGFDO43915 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VEGFDO43915 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
VEGFDO43915 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
VEGFDO43915 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VEGFDO43915 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.81■□□□□ 0.92
VEGFDO43915 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
VEGFDO43915 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.81■□□□□ 0.92
VEGFDO43915 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.81■□□□□ 0.92
VEGFDO43915 AC120498.10-201ENST00000621827 505 ntBASIC20.81■□□□□ 0.92
VEGFDO43915 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
VEGFDO43915 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VEGFDO43915 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.81■□□□□ 0.92
VEGFDO43915 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VEGFDO43915 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VEGFDO43915 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VEGFDO43915 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VEGFDO43915 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VEGFDO43915 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VEGFDO43915 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VEGFDO43915 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VEGFDO43915 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.8■□□□□ 0.92
VEGFDO43915 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms