Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 AC142086.6-201ENST00000621154 1765 ntBASIC20.42■□□□□ 0.86
SPTBN2O15020 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTBN2O15020 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.42■□□□□ 0.86
SPTBN2O15020 NTF6B-201ENST00000591913 560 ntBASIC20.42■□□□□ 0.86
SPTBN2O15020 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTBN2O15020 AL135905.2-201ENST00000584934 1404 ntBASIC20.42■□□□□ 0.86
SPTBN2O15020 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTBN2O15020 AC079630.1-202ENST00000618127 1840 ntBASIC20.42■□□□□ 0.86
SPTBN2O15020 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTBN2O15020 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SPTBN2O15020 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.42■□□□□ 0.86
SPTBN2O15020 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTBN2O15020 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 SOX15-203ENST00000570788 1093 ntBASIC20.41■□□□□ 0.86
SPTBN2O15020 AC060766.5-201ENST00000590539 871 ntBASIC20.41■□□□□ 0.86
SPTBN2O15020 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTBN2O15020 AL590326.2-201ENST00000625139 305 ntBASIC20.41■□□□□ 0.86
SPTBN2O15020 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.41■□□□□ 0.86
SPTBN2O15020 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTBN2O15020 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTBN2O15020 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.4■□□□□ 0.86
SPTBN2O15020 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTBN2O15020 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTBN2O15020 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SPTBN2O15020 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.39■□□□□ 0.85
SPTBN2O15020 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.39■□□□□ 0.85
SPTBN2O15020 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.39■□□□□ 0.85
SPTBN2O15020 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.39■□□□□ 0.85
SPTBN2O15020 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.39■□□□□ 0.85
SPTBN2O15020 AP001412.1-201ENST00000608405 714 ntBASIC20.39■□□□□ 0.85
SPTBN2O15020 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTBN2O15020 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.38■□□□□ 0.85
SPTBN2O15020 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.38■□□□□ 0.85
SPTBN2O15020 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 AC022211.4-201ENST00000625094 2161 ntBASIC20.38■□□□□ 0.85
SPTBN2O15020 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
SPTBN2O15020 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SPTBN2O15020 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SPTBN2O15020 POM121L13P-201ENST00000422362 380 ntBASIC20.38■□□□□ 0.85
SPTBN2O15020 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTBN2O15020 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SPTBN2O15020 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.38■□□□□ 0.85
SPTBN2O15020 RBM17P2-201ENST00000616397 1405 ntBASIC20.38■□□□□ 0.85
SPTBN2O15020 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
SPTBN2O15020 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SPTBN2O15020 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.37■□□□□ 0.85
SPTBN2O15020 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTBN2O15020 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SPTBN2O15020 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 AL121894.2-201ENST00000602977 491 ntBASIC20.37■□□□□ 0.85
SPTBN2O15020 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.37■□□□□ 0.85
SPTBN2O15020 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.37■□□□□ 0.85
SPTBN2O15020 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTBN2O15020 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.37■□□□□ 0.85
SPTBN2O15020 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 KRT18P57-201ENST00000443599 1254 ntBASIC20.37■□□□□ 0.85
SPTBN2O15020 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.37■□□□□ 0.85
SPTBN2O15020 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.37■□□□□ 0.85
SPTBN2O15020 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.37■□□□□ 0.85
SPTBN2O15020 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTBN2O15020 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SPTBN2O15020 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTBN2O15020 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTBN2O15020 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SPTBN2O15020 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPTBN2O15020 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTBN2O15020 LSM12P1-201ENST00000411836 588 ntBASIC20.36■□□□□ 0.85
SPTBN2O15020 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPTBN2O15020 TPM4P1-201ENST00000436100 807 ntBASIC20.36■□□□□ 0.85
SPTBN2O15020 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.36■□□□□ 0.85
SPTBN2O15020 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.36■□□□□ 0.85
SPTBN2O15020 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SPTBN2O15020 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms