Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDH17O14917 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.21■□□□□ 0.83
PCDH17O14917 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH17O14917 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDH17O14917 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
PCDH17O14917 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH17O14917 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.83
PCDH17O14917 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PCDH17O14917 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCDH17O14917 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDH17O14917 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDH17O14917 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH17O14917 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH17O14917 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH17O14917 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDH17O14917 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDH17O14917 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDH17O14917 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDH17O14917 AC026310.3-201ENST00000625186 2373 ntBASIC20.19■□□□□ 0.82
PCDH17O14917 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDH17O14917 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PCDH17O14917 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH17O14917 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH17O14917 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDH17O14917 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDH17O14917 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH17O14917 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDH17O14917 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDH17O14917 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 KRT19P1-201ENST00000405746 1186 ntBASIC20.18■□□□□ 0.82
PCDH17O14917 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDH17O14917 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH17O14917 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH17O14917 AC092437.1-201ENST00000624794 1048 ntBASIC20.18■□□□□ 0.82
PCDH17O14917 AC005224.4-201ENST00000583262 1652 ntBASIC20.18■□□□□ 0.82
PCDH17O14917 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH17O14917 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDH17O14917 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH17O14917 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH17O14917 AC079140.4-201ENST00000507448 529 ntBASIC20.17■□□□□ 0.82
PCDH17O14917 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
PCDH17O14917 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH17O14917 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 AC010542.4-201ENST00000563151 1910 ntBASIC20.17■□□□□ 0.82
PCDH17O14917 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 FAM99A-202ENST00000538190 1989 ntBASIC20.17■□□□□ 0.82
PCDH17O14917 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH17O14917 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH17O14917 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDH17O14917 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH17O14917 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDH17O14917 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH17O14917 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH17O14917 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms