Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC113410.3-201ENST00000623366 203 ntBASIC22.9■■□□□ 1.26
SOX1O00570 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SOX1O00570 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.89■■□□□ 1.25
SOX1O00570 TPM4P1-201ENST00000436100 807 ntBASIC22.89■■□□□ 1.25
SOX1O00570 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SOX1O00570 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SOX1O00570 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.89■■□□□ 1.25
SOX1O00570 SOX15-203ENST00000570788 1093 ntBASIC22.89■■□□□ 1.25
SOX1O00570 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SOX1O00570 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.89■■□□□ 1.25
SOX1O00570 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SOX1O00570 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.89■■□□□ 1.25
SOX1O00570 AC092368.3-202ENST00000574180 1591 ntBASIC22.89■■□□□ 1.25
SOX1O00570 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.89■■□□□ 1.25
SOX1O00570 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.88■■□□□ 1.25
SOX1O00570 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SOX1O00570 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.88■■□□□ 1.25
SOX1O00570 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.88■■□□□ 1.25
SOX1O00570 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.88■■□□□ 1.25
SOX1O00570 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.88■■□□□ 1.25
SOX1O00570 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
SOX1O00570 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.88■■□□□ 1.25
SOX1O00570 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOX1O00570 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SOX1O00570 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.87■■□□□ 1.25
SOX1O00570 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
SOX1O00570 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.87■■□□□ 1.25
SOX1O00570 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.87■■□□□ 1.25
SOX1O00570 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOX1O00570 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.86■■□□□ 1.25
SOX1O00570 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
SOX1O00570 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.86■■□□□ 1.25
SOX1O00570 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.86■■□□□ 1.25
SOX1O00570 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.86■■□□□ 1.25
SOX1O00570 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.86■■□□□ 1.25
SOX1O00570 AC053503.5-201ENST00000601508 636 ntBASIC22.86■■□□□ 1.25
SOX1O00570 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.86■■□□□ 1.25
SOX1O00570 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOX1O00570 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.86■■□□□ 1.25
SOX1O00570 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.86■■□□□ 1.25
SOX1O00570 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.85■■□□□ 1.25
SOX1O00570 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SOX1O00570 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.85■■□□□ 1.25
SOX1O00570 AP001412.1-201ENST00000608405 714 ntBASIC22.85■■□□□ 1.25
SOX1O00570 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOX1O00570 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 RBM17P2-201ENST00000616397 1405 ntBASIC22.84■■□□□ 1.25
SOX1O00570 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.84■■□□□ 1.25
SOX1O00570 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.84■■□□□ 1.25
SOX1O00570 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.84■■□□□ 1.25
SOX1O00570 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.84■■□□□ 1.25
SOX1O00570 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.84■■□□□ 1.25
SOX1O00570 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.84■■□□□ 1.25
SOX1O00570 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.84■■□□□ 1.25
SOX1O00570 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SOX1O00570 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOX1O00570 DUSP8P3-201ENST00000399571 1760 ntBASIC22.84■■□□□ 1.25
SOX1O00570 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOX1O00570 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOX1O00570 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOX1O00570 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SOX1O00570 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOX1O00570 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SOX1O00570 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOX1O00570 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.83■■□□□ 1.25
SOX1O00570 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms