Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SIRPB1O00241 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SIRPB1O00241 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.9■□□□□ 0.46
SIRPB1O00241 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.9■□□□□ 0.46
SIRPB1O00241 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.9■□□□□ 0.46
SIRPB1O00241 AL355001.2-201ENST00000620617 1191 ntBASIC17.9■□□□□ 0.46
SIRPB1O00241 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.9■□□□□ 0.46
SIRPB1O00241 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SIRPB1O00241 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIRPB1O00241 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIRPB1O00241 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.89■□□□□ 0.45
SIRPB1O00241 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SIRPB1O00241 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.89■□□□□ 0.45
SIRPB1O00241 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.89■□□□□ 0.45
SIRPB1O00241 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.89■□□□□ 0.45
SIRPB1O00241 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SIRPB1O00241 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIRPB1O00241 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 AP006587.3-201ENST00000525742 1516 ntBASIC17.88■□□□□ 0.45
SIRPB1O00241 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.88■□□□□ 0.45
SIRPB1O00241 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.88■□□□□ 0.45
SIRPB1O00241 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
SIRPB1O00241 AC105233.4-201ENST00000642045 216 ntBASIC17.88■□□□□ 0.45
SIRPB1O00241 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.88■□□□□ 0.45
SIRPB1O00241 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIRPB1O00241 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIRPB1O00241 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.87■□□□□ 0.45
SIRPB1O00241 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 AC003102.1-202ENST00000563394 1796 ntBASIC17.87■□□□□ 0.45
SIRPB1O00241 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIRPB1O00241 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.87■□□□□ 0.45
SIRPB1O00241 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SIRPB1O00241 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.87■□□□□ 0.45
SIRPB1O00241 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 RASA4CP-201ENST00000424092 1398 ntBASIC17.87■□□□□ 0.45
SIRPB1O00241 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SIRPB1O00241 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 AC005229.4-201ENST00000610085 2198 ntBASIC17.87■□□□□ 0.45
SIRPB1O00241 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
SIRPB1O00241 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SIRPB1O00241 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIRPB1O00241 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.86■□□□□ 0.45
SIRPB1O00241 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.86■□□□□ 0.45
SIRPB1O00241 MIR939-201ENST00000401314 82 ntBASIC17.86■□□□□ 0.45
SIRPB1O00241 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SIRPB1O00241 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.86■□□□□ 0.45
SIRPB1O00241 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.86■□□□□ 0.45
SIRPB1O00241 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SIRPB1O00241 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.86■□□□□ 0.45
SIRPB1O00241 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms