Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF223E7ERA6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF223E7ERA6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF223E7ERA6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF223E7ERA6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 AC091874.3-201ENST00000512672 1195 ntBASIC17.64■□□□□ 0.41
RNF223E7ERA6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF223E7ERA6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF223E7ERA6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF223E7ERA6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF223E7ERA6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 AC128676.1-201ENST00000454392 318 ntBASIC17.63■□□□□ 0.41
RNF223E7ERA6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF223E7ERA6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF223E7ERA6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF223E7ERA6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF223E7ERA6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 AC010980.2-201ENST00000587099 1412 ntBASIC17.62■□□□□ 0.41
RNF223E7ERA6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF223E7ERA6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RNF223E7ERA6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 POU5F1P4-201ENST00000413175 1085 ntBASIC17.61■□□□□ 0.41
RNF223E7ERA6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 RPS2P4-201ENST00000476944 856 ntBASIC17.61■□□□□ 0.41
RNF223E7ERA6 AC120057.1-201ENST00000483947 663 ntBASIC17.61■□□□□ 0.41
RNF223E7ERA6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 AL591742.1-201ENST00000604433 565 ntBASIC17.61■□□□□ 0.41
RNF223E7ERA6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF223E7ERA6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF223E7ERA6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.6■□□□□ 0.41
RNF223E7ERA6 AL596275.1-201ENST00000423464 877 ntBASIC17.6■□□□□ 0.41
RNF223E7ERA6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.6■□□□□ 0.41
RNF223E7ERA6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF223E7ERA6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF223E7ERA6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms