Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 LINC00543-201ENST00000567234 1845 ntBASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TMEM88BA6NKF7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM88BA6NKF7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 POU5F1P4-201ENST00000413175 1085 ntBASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 AL355472.2-201ENST00000422958 438 ntBASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 TSPY15P-201ENST00000457163 923 ntBASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 CD177P1-201ENST00000606252 935 ntBASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.03■■□□□ 1.6
TMEM88BA6NKF7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 AC092368.3-202ENST00000574180 1591 ntBASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 AC079089.2-201ENST00000531211 1277 ntBASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 MIR4785-201ENST00000585005 73 ntBASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 AC145676.1-201ENST00000514988 2004 ntBASIC25.02■■□□□ 1.6
TMEM88BA6NKF7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 AP001412.1-201ENST00000608405 714 ntBASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 AC243732.1-201ENST00000612648 864 ntBASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 AL049637.2-201ENST00000641778 930 ntBASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM88BA6NKF7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 RN7SL850P-201ENST00000579959 291 ntBASIC25■■□□□ 1.59
TMEM88BA6NKF7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
TMEM88BA6NKF7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25■■□□□ 1.59
TMEM88BA6NKF7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TMEM88BA6NKF7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms