Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MBD3L3A6NE82 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 CYP2T1P-201ENST00000432607 1285 ntBASIC18.73■□□□□ 0.59
MBD3L3A6NE82 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 AC105036.2-201ENST00000569468 176 ntBASIC18.73■□□□□ 0.59
MBD3L3A6NE82 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD3L3A6NE82 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 C9orf163-202ENST00000624034 2573 ntBASIC18.72■□□□□ 0.59
MBD3L3A6NE82 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MBD3L3A6NE82 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 AC243732.1-201ENST00000612648 864 ntBASIC18.71■□□□□ 0.59
MBD3L3A6NE82 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 RBM17P2-201ENST00000616397 1405 ntBASIC18.71■□□□□ 0.59
MBD3L3A6NE82 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 AC061975.6-201ENST00000579045 1553 ntBASIC18.71■□□□□ 0.59
MBD3L3A6NE82 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MBD3L3A6NE82 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 OR10C1-204ENST00000622521 1039 ntBASIC18.7■□□□□ 0.58
MBD3L3A6NE82 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MBD3L3A6NE82 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MBD3L3A6NE82 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms