Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TCRBV3S1A0A5B6 AL391422.3-201ENST00000603791 2761 ntBASIC19.89■□□□□ 0.78
TCRBV3S1A0A5B6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.89■□□□□ 0.78
TCRBV3S1A0A5B6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV3S1A0A5B6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 PLK5-205ENST00000642079 1969 ntBASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 NTF6A-201ENST00000591175 560 ntBASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV3S1A0A5B6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 AC021242.3-201ENST00000607598 1377 ntBASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 AC103834.1-201ENST00000520383 144 ntBASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV3S1A0A5B6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 AC103724.3-201ENST00000564481 992 ntBASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV3S1A0A5B6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 AC003102.1-202ENST00000563394 1796 ntBASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV3S1A0A5B6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms