Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV20A0A0B4J274 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV20A0A0B4J274 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV20A0A0B4J274 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV20A0A0B4J274 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV20A0A0B4J274 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 KRT19P1-201ENST00000405746 1186 ntBASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV20A0A0B4J274 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 AC006015.1-201ENST00000429970 570 ntBASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 AP004607.4-201ENST00000530158 1459 ntBASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV20A0A0B4J274 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV20A0A0B4J274 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 DUSP8P3-201ENST00000399571 1760 ntBASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 ID1-201ENST00000376105 1233 ntBASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV20A0A0B4J274 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 AC004854.2-201ENST00000608450 1441 ntBASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 AC007952.6-201ENST00000573168 2673 ntBASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 AC003957.1-201ENST00000625108 2673 ntBASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRAV20A0A0B4J274 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms