Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.134e-9■□□□□ 9.5
DDX3XO00571 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.134e-9■□□□□ 9.5
DDX3XO00571 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.144e-9■□□□□ 9.5
DDX3XO00571 PRR13-211ENST00000551365 1375 ntTSL 313.97□□□□□ -0.176e-12■□□□□ 9.5
DDX3XO00571 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.172e-6■□□□□ 9.5
DDX3XO00571 ABHD14B-205ENST00000473912 477 ntTSL 213.9□□□□□ -0.184e-9■□□□□ 9.5
DDX3XO00571 CCDC84-208ENST00000534656 588 ntTSL 213.79□□□□□ -0.22e-6■□□□□ 9.5
DDX3XO00571 ZFYVE19-214ENST00000569057 1036 ntTSL 513.78□□□□□ -0.22e-6■□□□□ 9.5
DDX3XO00571 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.216e-12■□□□□ 9.5
DDX3XO00571 TRAPPC6B-207ENST00000557764 870 ntTSL 213.53□□□□□ -0.246e-12■□□□□ 9.5
DDX3XO00571 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.254e-9■□□□□ 9.5
DDX3XO00571 ZFYVE19-206ENST00000561768 1486 ntTSL 513.39□□□□□ -0.272e-6■□□□□ 9.5
DDX3XO00571 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.274e-9■□□□□ 9.5
DDX3XO00571 ZFYVE19-205ENST00000561617 812 ntTSL 513.32□□□□□ -0.282e-6■□□□□ 9.5
DDX3XO00571 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.29□□□□□ -0.286e-12■□□□□ 9.5
DDX3XO00571 QARS-248ENST00000636669 2410 ntTSL 513.1□□□□□ -0.316e-12■□□□□ 9.5
DDX3XO00571 HERC1-205ENST00000559886 2462 ntTSL 1 (best)13.01□□□□□ -0.334e-9■□□□□ 9.5
DDX3XO00571 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■□□□□ 9.5
DDX3XO00571 TRAPPC6B-205ENST00000555269 1000 ntTSL 1 (best)12.8□□□□□ -0.366e-12■□□□□ 9.5
DDX3XO00571 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.372e-6■□□□□ 9.5
DDX3XO00571 QARS-245ENST00000635541 907 ntTSL 312.53□□□□□ -0.46e-12■□□□□ 9.5
DDX3XO00571 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)12.49□□□□□ -0.414e-9■□□□□ 9.5
DDX3XO00571 RPRD2-204ENST00000492220 4780 ntTSL 512.42□□□□□ -0.422e-6■□□□□ 9.5
DDX3XO00571 QARS-227ENST00000634425 520 ntTSL 512.39□□□□□ -0.436e-12■□□□□ 9.5
DDX3XO00571 QARS-241ENST00000635375 947 ntTSL 312.39□□□□□ -0.436e-12■□□□□ 9.5
DDX3XO00571 HERC1-214ENST00000561400 2215 ntTSL 212.25□□□□□ -0.454e-9■□□□□ 9.5
DDX3XO00571 MTHFD2-204ENST00000462026 599 ntTSL 512.25□□□□□ -0.452e-6■□□□□ 9.5
DDX3XO00571 SLC27A5-206ENST00000599700 474 ntTSL 212.11□□□□□ -0.476e-12■□□□□ 9.5
DDX3XO00571 TRAPPC6B-204ENST00000554018 541 ntTSL 412.05□□□□□ -0.486e-12■□□□□ 9.5
DDX3XO00571 EHMT1-230ENST00000636186 100 ntTSL 512.03□□□□□ -0.482e-6■□□□□ 9.5
DDX3XO00571 UNC119-208ENST00000581945 538 ntTSL 311.95□□□□□ -0.54e-9■□□□□ 9.5
DDX3XO00571 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.516e-12■□□□□ 9.5
DDX3XO00571 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.536e-12■□□□□ 9.5
DDX3XO00571 EHMT1-231ENST00000636376 100 ntTSL 511.75□□□□□ -0.532e-6■□□□□ 9.5
DDX3XO00571 QARS-247ENST00000636018 2171 ntTSL 511.74□□□□□ -0.536e-12■□□□□ 9.5
DDX3XO00571 AIP-204ENST00000529797 801 ntTSL 211.7□□□□□ -0.542e-6■□□□□ 9.5
DDX3XO00571 PCBP4-213ENST00000489595 539 ntTSL 411.67□□□□□ -0.544e-9■□□□□ 9.5
DDX3XO00571 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC11.62□□□□□ -0.552e-6■□□□□ 9.5
DDX3XO00571 SNUPN-203ENST00000563875 406 ntTSL 311.61□□□□□ -0.552e-6■□□□□ 9.5
DDX3XO00571 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC11.5□□□□□ -0.576e-12■□□□□ 9.5
DDX3XO00571 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.584e-9■□□□□ 9.5
DDX3XO00571 EHMT1-245ENST00000637662 89 ntTSL 511.37□□□□□ -0.592e-6■□□□□ 9.5
DDX3XO00571 RHOH-202ENST00000503754 557 ntTSL 411.14□□□□□ -0.634e-9■□□□□ 9.5
DDX3XO00571 RHOH-207ENST00000507851 814 ntTSL 311.14□□□□□ -0.634e-9■□□□□ 9.5
DDX3XO00571 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.642e-6■□□□□ 9.5
DDX3XO00571 EHMT1-241ENST00000637335 86 ntTSL 510.98□□□□□ -0.652e-6■□□□□ 9.5
DDX3XO00571 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC10.97□□□□□ -0.656e-12■□□□□ 9.5
DDX3XO00571 SMYD3-203ENST00000391836 732 ntTSL 510.95□□□□□ -0.662e-6■□□□□ 9.5
DDX3XO00571 PRR13-213ENST00000552846 407 ntTSL 310.95□□□□□ -0.666e-12■□□□□ 9.5
DDX3XO00571 SNUPN-202ENST00000563793 661 ntTSL 410.39□□□□□ -0.752e-6■□□□□ 9.5
DDX3XO00571 SLC27A5-208ENST00000601997 575 ntTSL 210.34□□□□□ -0.756e-12■□□□□ 9.5
DDX3XO00571 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.776e-12■□□□□ 9.5
DDX3XO00571 AL590627.2-202ENST00000636318 138 ntTSL 510.26□□□□□ -0.772e-6■□□□□ 9.5
DDX3XO00571 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.792e-6■□□□□ 9.5
DDX3XO00571 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9.89□□□□□ -0.832e-17■□□□□ 9.5
DDX3XO00571 RHOH-205ENST00000504638 530 ntTSL 29.82□□□□□ -0.844e-9■□□□□ 9.5
DDX3XO00571 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.846e-12■□□□□ 9.5
DDX3XO00571 RHOH-203ENST00000503941 789 ntTSL 29.58□□□□□ -0.884e-9■□□□□ 9.5
DDX3XO00571 RHOH-208ENST00000508513 874 ntTSL 39.58□□□□□ -0.884e-9■□□□□ 9.5
DDX3XO00571 RHOH-211ENST00000513894 571 ntTSL 49.53□□□□□ -0.884e-9■□□□□ 9.5
DDX3XO00571 SH3BGRL-202ENST00000463546 755 ntTSL 29.42□□□□□ -0.92e-6■□□□□ 9.5
DDX3XO00571 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.926e-12■□□□□ 9.5
DDX3XO00571 SH3BGRL-203ENST00000474113 739 ntTSL 39.26□□□□□ -0.932e-6■□□□□ 9.5
DDX3XO00571 EEF1E1-203ENST00000488226 443 ntTSL 28.79□□□□□ -18e-23■□□□□ 9.5
DDX3XO00571 TRAPPC6B-203ENST00000469361 4533 ntTSL 28.73□□□□□ -1.016e-12■□□□□ 9.5
DDX3XO00571 SMYD3-216ENST00000492487 634 ntTSL 38.68□□□□□ -1.022e-6■□□□□ 9.5
DDX3XO00571 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.66□□□□□ -1.024e-9■□□□□ 9.5
DDX3XO00571 QARS-240ENST00000635292 574 ntTSL 48.59□□□□□ -1.036e-12■□□□□ 9.5
DDX3XO00571 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.042e-6■□□□□ 9.5
DDX3XO00571 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.056e-12■□□□□ 9.5
DDX3XO00571 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.066e-12■□□□□ 9.5
DDX3XO00571 CCDC82-207ENST00000538597 849 ntAPPRIS ALT2 TSL 38.45□□□□□ -1.062e-6■□□□□ 9.5
DDX3XO00571 RHOH-210ENST00000511967 423 ntTSL 38.36□□□□□ -1.074e-9■□□□□ 9.5
DDX3XO00571 IPO7-207ENST00000533680 639 ntTSL 58.27□□□□□ -1.092e-6■□□□□ 9.5
DDX3XO00571 SNUPN-204ENST00000564086 644 ntTSL 28.05□□□□□ -1.122e-6■□□□□ 9.5
DDX3XO00571 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.136e-12■□□□□ 9.5
DDX3XO00571 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8□□□□□ -1.132e-6■□□□□ 9.5
DDX3XO00571 RHOH-209ENST00000511121 571 ntTSL 28□□□□□ -1.134e-9■□□□□ 9.5
DDX3XO00571 AC087380.1-201ENST00000420465 1001 ntTSL 37.66□□□□□ -1.184e-9■□□□□ 9.5
DDX3XO00571 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.66□□□□□ -1.186e-12■□□□□ 9.5
DDX3XO00571 RHOH-212ENST00000514143 587 ntTSL 37.19□□□□□ -1.264e-9■□□□□ 9.5
DDX3XO00571 PRR13-212ENST00000551945 261 ntAPPRIS ALT2 TSL 36.81□□□□□ -1.326e-12■□□□□ 9.5
DDX3XO00571 RHOH-215ENST00000515702 574 ntTSL 46.73□□□□□ -1.334e-9■□□□□ 9.5
DDX3XO00571 RHOH-204ENST00000503978 545 ntTSL 46.55□□□□□ -1.364e-9■□□□□ 9.5
DDX3XO00571 AC087380.1-203ENST00000420726 752 ntTSL 56.46□□□□□ -1.384e-9■□□□□ 9.5
DDX3XO00571 CCDC82-203ENST00000524836 492 ntTSL 36.42□□□□□ -1.382e-6■□□□□ 9.5
DDX3XO00571 FANCI-215ENST00000568670 285 ntTSL 36.42□□□□□ -1.382e-6■□□□□ 9.5
DDX3XO00571 RHOH-216ENST00000515718 574 ntTSL 46.41□□□□□ -1.384e-9■□□□□ 9.5
DDX3XO00571 MORC3-204ENST00000485933 417 ntTSL 56.13□□□□□ -1.432e-6■□□□□ 9.5
DDX3XO00571 HERC1-208ENST00000560462 647 ntTSL 25.99□□□□□ -1.454e-9■□□□□ 9.5
DDX3XO00571 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.456e-12■□□□□ 9.5
DDX3XO00571 ACOT13-202ENST00000476436 733 ntTSL 35.75□□□□□ -1.492e-6■□□□□ 9.5
DDX3XO00571 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.532e-6■□□□□ 9.5
DDX3XO00571 RHOH-214ENST00000515503 549 ntTSL 45.38□□□□□ -1.554e-9■□□□□ 9.5
DDX3XO00571 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.554e-9■□□□□ 9.5
DDX3XO00571 SMYD3-205ENST00000453676 562 ntTSL 44.99□□□□□ -1.612e-6■□□□□ 9.5
DDX3XO00571 RHOH-213ENST00000514839 560 ntTSL 44.93□□□□□ -1.624e-9■□□□□ 9.5
DDX3XO00571 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.652e-6■□□□□ 9.5
DDX3XO00571 FANCI-205ENST00000563250 700 ntTSL 54.52□□□□□ -1.692e-6■□□□□ 9.5
DDX3XO00571 QRICH1-203ENST00000411682 359 ntTSL 54.3□□□□□ -1.722e-6■□□□□ 9.5
Retrieved 100 of 47,714 protein–RNA pairs in 1446.5 ms