Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 AC120498.10-201ENST00000621827 505 ntBASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HCFC2Q9Y5Z7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 ESRRAP1-201ENST00000400596 1257 ntBASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 AC097658.1-201ENST00000475555 843 ntBASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCFC2Q9Y5Z7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.4■■□□□ 1.18
HCFC2Q9Y5Z7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.39■■□□□ 1.18
HCFC2Q9Y5Z7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HCFC2Q9Y5Z7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
HCFC2Q9Y5Z7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCFC2Q9Y5Z7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 AC091874.3-201ENST00000512672 1195 ntBASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCFC2Q9Y5Z7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 POU5F1P4-201ENST00000413175 1085 ntBASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 GCSHP5-201ENST00000443090 522 ntBASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 AC010980.2-201ENST00000587099 1412 ntBASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
HCFC2Q9Y5Z7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 AL162412.1-201ENST00000567129 965 ntBASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 AP006294.2-201ENST00000641667 209 ntBASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC2Q9Y5Z7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms