Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB3Q9Y5G1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 AC005229.4-201ENST00000610085 2198 ntBASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 AC008764.7-201ENST00000593779 1081 ntBASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB3Q9Y5G1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGB3Q9Y5G1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 AC026271.2-201ENST00000428091 497 ntBASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB3Q9Y5G1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 IRS3P-201ENST00000223076 1006 ntBASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB3Q9Y5G1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHGB3Q9Y5G1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PCDHGB3Q9Y5G1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB3Q9Y5G1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHGB3Q9Y5G1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB3Q9Y5G1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHGB3Q9Y5G1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 AL034346.1-201ENST00000568244 1277 ntBASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 MIR5787-201ENST00000611784 55 ntBASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 MIR6821-201ENST00000617625 74 ntBASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGB3Q9Y5G1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms