Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
YIPF1Q9Y548 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 AC008175.2-201ENST00000612840 297 ntBASIC22.33■■□□□ 1.17
YIPF1Q9Y548 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.33■■□□□ 1.17
YIPF1Q9Y548 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
YIPF1Q9Y548 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
YIPF1Q9Y548 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
YIPF1Q9Y548 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
YIPF1Q9Y548 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.32■■□□□ 1.16
YIPF1Q9Y548 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 SLC29A4P1-201ENST00000398760 971 ntBASIC22.31■■□□□ 1.16
YIPF1Q9Y548 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 AF201337.1-201ENST00000520239 748 ntBASIC22.31■■□□□ 1.16
YIPF1Q9Y548 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YIPF1Q9Y548 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 CYP2T1P-201ENST00000432607 1285 ntBASIC22.3■■□□□ 1.16
YIPF1Q9Y548 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 AL138781.1-201ENST00000566567 1274 ntBASIC22.3■■□□□ 1.16
YIPF1Q9Y548 AC105036.2-201ENST00000569468 176 ntBASIC22.3■■□□□ 1.16
YIPF1Q9Y548 AC133552.2-202ENST00000575694 574 ntBASIC22.3■■□□□ 1.16
YIPF1Q9Y548 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 AC120498.10-201ENST00000621827 505 ntBASIC22.3■■□□□ 1.16
YIPF1Q9Y548 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.3■■□□□ 1.16
YIPF1Q9Y548 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 POU5F1P4-201ENST00000413175 1085 ntBASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AC007322.4-201ENST00000509611 723 ntBASIC22.29■■□□□ 1.16
YIPF1Q9Y548 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 C1orf229-201ENST00000623686 2258 ntBASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AC068338.2-201ENST00000563278 1430 ntBASIC22.29■■□□□ 1.16
YIPF1Q9Y548 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
YIPF1Q9Y548 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 AC080038.3-201ENST00000623346 1952 ntBASIC22.28■■□□□ 1.16
YIPF1Q9Y548 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
YIPF1Q9Y548 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 AC003102.1-202ENST00000563394 1796 ntBASIC22.27■■□□□ 1.16
YIPF1Q9Y548 AC127496.7-201ENST00000625110 1798 ntBASIC22.27■■□□□ 1.16
YIPF1Q9Y548 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YIPF1Q9Y548 AC092053.2-201ENST00000640557 1818 ntBASIC22.27■■□□□ 1.15
YIPF1Q9Y548 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms