Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AC006015.1-201ENST00000429970 570 ntBASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 AP004607.4-201ENST00000530158 1459 ntBASIC24.01■■□□□ 1.43
KDM3AQ9Y4C1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
KDM3AQ9Y4C1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 LINC00565-201ENST00000562710 2331 ntBASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KDM3AQ9Y4C1 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KDM3AQ9Y4C1 AC005224.4-201ENST00000583262 1652 ntBASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KDM3AQ9Y4C1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 AC004854.2-201ENST00000608450 1441 ntBASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 AC010542.4-201ENST00000563151 1910 ntBASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 AC026471.6-201ENST00000622954 1905 ntBASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.96■■□□□ 1.43
KDM3AQ9Y4C1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.95■■□□□ 1.43
KDM3AQ9Y4C1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KDM3AQ9Y4C1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms