Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 AL359736.2-201ENST00000621992 437 ntBASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 LINC01960-201ENST00000563759 1884 ntBASIC21.56■■□□□ 1.04
SIT1Q9Y3P8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 POU5F1P4-201ENST00000413175 1085 ntBASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 AP006587.3-201ENST00000525742 1516 ntBASIC21.55■■□□□ 1.04
SIT1Q9Y3P8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIT1Q9Y3P8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
SIT1Q9Y3P8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 MIR1224-201ENST00000408193 85 ntBASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 ECEL1P3-201ENST00000427961 737 ntBASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 FAM197Y4-202ENST00000622692 608 ntBASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 AC073912.3-201ENST00000624414 853 ntBASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 RBM17P2-201ENST00000616397 1405 ntBASIC21.52■■□□□ 1.04
SIT1Q9Y3P8 ABCB10P4-201ENST00000566803 2184 ntBASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 MIR4497-201ENST00000583208 89 ntBASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIT1Q9Y3P8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms