Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 AC068338.2-201ENST00000563278 1430 ntBASIC20.13■□□□□ 0.81
LHX6Q9UPM6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 AC012183.1-201ENST00000625197 499 ntBASIC20.13■□□□□ 0.81
LHX6Q9UPM6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LHX6Q9UPM6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 Z99916.2-201ENST00000604037 246 ntBASIC20.12■□□□□ 0.81
LHX6Q9UPM6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.12■□□□□ 0.81
LHX6Q9UPM6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 ARMC10P1-201ENST00000313754 855 ntBASIC20.11■□□□□ 0.81
LHX6Q9UPM6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AC091874.3-201ENST00000512672 1195 ntBASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AC016405.3-201ENST00000607710 860 ntBASIC20.11■□□□□ 0.81
LHX6Q9UPM6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LHX6Q9UPM6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 AL512625.2-201ENST00000417533 625 ntBASIC20.1■□□□□ 0.81
LHX6Q9UPM6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 AC069236.1-201ENST00000604339 616 ntBASIC20.1■□□□□ 0.81
LHX6Q9UPM6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX6Q9UPM6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 KRT18P35-201ENST00000510488 1269 ntBASIC20.09■□□□□ 0.81
LHX6Q9UPM6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 AC133561.5-201ENST00000635547 218 ntBASIC20.09■□□□□ 0.81
LHX6Q9UPM6 AC068587.7-201ENST00000641602 218 ntBASIC20.09■□□□□ 0.81
LHX6Q9UPM6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX6Q9UPM6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.08■□□□□ 0.81
LHX6Q9UPM6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LHX6Q9UPM6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 RPPH1-201ENST00000516869 333 ntBASIC20.07■□□□□ 0.8
LHX6Q9UPM6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX6Q9UPM6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms