Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHGC3Q9UN70 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHGC3Q9UN70 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGC3Q9UN70 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 Z98882.1-201ENST00000622160 2253 ntBASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 AC123595.1-201ENST00000440769 1046 ntBASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC3Q9UN70 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC3Q9UN70 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 YBX1P1-201ENST00000445822 960 ntBASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 LINC02228-203ENST00000641970 1355 ntBASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC3Q9UN70 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 CLDN5-201ENST00000403084 2357 ntBASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 AC026310.3-201ENST00000625186 2373 ntBASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC3Q9UN70 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms