Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTI1BQ9UEU0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 MIR3181-201ENST00000578512 73 ntBASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.85■□□□□ 0.93
VTI1BQ9UEU0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 AL139246.5-201ENST00000606645 996 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 pRNA.6-201ENST00000610482 90 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 pRNA.5-201ENST00000612139 90 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 AC110285.6-201ENST00000617652 491 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 pRNA.11-201ENST00000618423 90 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 pRNA.13-201ENST00000619112 90 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 AC068587.7-201ENST00000641602 218 ntBASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.84■□□□□ 0.93
VTI1BQ9UEU0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 AC133637.1-201ENST00000624115 1537 ntBASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VTI1BQ9UEU0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VTI1BQ9UEU0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 AL136162.1-201ENST00000607711 1078 ntBASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 AC011298.3-201ENST00000615796 283 ntBASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.82■□□□□ 0.92
VTI1BQ9UEU0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms