Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 SLC7A5P1-201ENST00000568957 537 ntBASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 AC133552.2-202ENST00000575694 574 ntBASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.83■□□□□ 0.93
NLGN3Q9NZ94 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NLGN3Q9NZ94 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NLGN3Q9NZ94 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NLGN3Q9NZ94 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NLGN3Q9NZ94 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NLGN3Q9NZ94 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 AC053503.5-201ENST00000601508 636 ntBASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 AC013268.1-206ENST00000638368 961 ntBASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 AC112229.1-201ENST00000639295 961 ntBASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 AP006587.3-201ENST00000525742 1516 ntBASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLGN3Q9NZ94 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 KRT18P6-201ENST00000555540 1265 ntBASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 AL138781.1-201ENST00000566567 1274 ntBASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 TMEM191A-211ENST00000637163 1067 ntBASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 C9orf163-202ENST00000624034 2573 ntBASIC20.81■□□□□ 0.92
NLGN3Q9NZ94 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 AC105036.2-201ENST00000569468 176 ntBASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
NLGN3Q9NZ94 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLGN3Q9NZ94 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 AC069152.1-201ENST00000438030 544 ntBASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 TERF1P5-201ENST00000477545 1207 ntBASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 AC133041.1-202ENST00000642053 222 ntBASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NLGN3Q9NZ94 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.77■□□□□ 0.92
NLGN3Q9NZ94 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms