Protein–RNA interactions for Protein: Q9NQX3

GPHN, Gephyrin, humanhuman

Predicted RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPHNQ9NQX3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
GPHNQ9NQX3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
GPHNQ9NQX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.08■■□□□ 1.6
GPHNQ9NQX3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
GPHNQ9NQX3 AC007375.3-201ENST00000600936 2314 ntBASIC25.07■■□□□ 1.6
GPHNQ9NQX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.07■■□□□ 1.6
GPHNQ9NQX3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.06■■□□□ 1.6
GPHNQ9NQX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.06■■□□□ 1.6
GPHNQ9NQX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
GPHNQ9NQX3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 CCDC92B-201ENST00000575506 885 ntBASIC25.04■■□□□ 1.6
GPHNQ9NQX3 AC022517.1-201ENST00000592429 346 ntBASIC25.04■■□□□ 1.6
GPHNQ9NQX3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
GPHNQ9NQX3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 AC123595.1-201ENST00000440769 1046 ntBASIC25.03■■□□□ 1.6
GPHNQ9NQX3 TERF1P2-201ENST00000583350 1212 ntBASIC25.03■■□□□ 1.6
GPHNQ9NQX3 KRT18P61-201ENST00000585825 1298 ntBASIC25.03■■□□□ 1.6
GPHNQ9NQX3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
GPHNQ9NQX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 KRT18P5-201ENST00000436075 1291 ntBASIC25.02■■□□□ 1.6
GPHNQ9NQX3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 AL137784.2-201ENST00000607332 1000 ntBASIC25.02■■□□□ 1.6
GPHNQ9NQX3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
GPHNQ9NQX3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.01■■□□□ 1.59
GPHNQ9NQX3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
GPHNQ9NQX3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms