Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMG20AQ9NP66 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 YBX1P4-201ENST00000392794 808 ntBASIC19.23■□□□□ 0.67
HMG20AQ9NP66 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMG20AQ9NP66 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.22■□□□□ 0.67
HMG20AQ9NP66 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20AQ9NP66 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20AQ9NP66 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20AQ9NP66 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMG20AQ9NP66 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 KRT8P33-201ENST00000508125 1423 ntBASIC19.21■□□□□ 0.67
HMG20AQ9NP66 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMG20AQ9NP66 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 AC004448.1-201ENST00000458332 883 ntBASIC19.2■□□□□ 0.66
HMG20AQ9NP66 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 AC103724.3-201ENST00000564481 992 ntBASIC19.2■□□□□ 0.66
HMG20AQ9NP66 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMG20AQ9NP66 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.19■□□□□ 0.66
HMG20AQ9NP66 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMG20AQ9NP66 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms