Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 KRT19P1-201ENST00000405746 1186 ntBASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ATP6V0A4Q9HBG4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
ATP6V0A4Q9HBG4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ATP6V0A4Q9HBG4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.65■■□□□ 1.38
ATP6V0A4Q9HBG4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
ATP6V0A4Q9HBG4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ATP6V0A4Q9HBG4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ATP6V0A4Q9HBG4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.64■■□□□ 1.38
ATP6V0A4Q9HBG4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 HLA-L-209ENST00000420110 1011 ntBASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 AC104187.1-201ENST00000607510 612 ntBASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 AC073111.5-205ENST00000641717 521 ntBASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.64■■□□□ 1.37
ATP6V0A4Q9HBG4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 CDCA4P2-201ENST00000441182 718 ntBASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 BID-214ENST00000617586 542 ntTSL 5 BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.63■■□□□ 1.37
ATP6V0A4Q9HBG4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.62■■□□□ 1.37
ATP6V0A4Q9HBG4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 RAP2CP1-201ENST00000605103 478 ntBASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ATP6V0A4Q9HBG4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ATP6V0A4Q9HBG4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ATP6V0A4Q9HBG4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ATP6V0A4Q9HBG4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ATP6V0A4Q9HBG4 FAM99A-202ENST00000538190 1989 ntBASIC23.6■■□□□ 1.37
ATP6V0A4Q9HBG4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms