Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 AC004854.2-201ENST00000608450 1441 ntBASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP13A3Q9H7F0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP13A3Q9H7F0 AP004607.4-201ENST00000530158 1459 ntBASIC21.52■■□□□ 1.03
ATP13A3Q9H7F0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A3Q9H7F0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 AC104564.3-201ENST00000582367 638 ntBASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A3Q9H7F0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 KRT19P1-201ENST00000405746 1186 ntBASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A3Q9H7F0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 AC003102.1-202ENST00000563394 1796 ntBASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A3Q9H7F0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 KRT18P61-201ENST00000585825 1298 ntBASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A3Q9H7F0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 AC026471.6-201ENST00000622954 1905 ntBASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A3Q9H7F0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms