Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXorf56Q9H5V9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXorf56Q9H5V9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXorf56Q9H5V9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 FZD10-202ENST00000539839 3282 ntBASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 NEFHP1-201ENST00000412845 2629 ntBASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXorf56Q9H5V9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 MIR6089-201ENST00000616698 64 ntBASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 AC005332.8-201ENST00000622750 2735 ntBASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXorf56Q9H5V9 AC004408.2-201ENST00000623613 2777 ntBASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 AC020916.1-201ENST00000587762 1774 ntBASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 NOC2LP1-202ENST00000452600 2235 ntBASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXorf56Q9H5V9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.52■□□□□ 0.87
CXorf56Q9H5V9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CXorf56Q9H5V9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.51■□□□□ 0.87
CXorf56Q9H5V9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CXorf56Q9H5V9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms