Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDC42EP4Q9H3Q1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.64■■□□□ 1.06
CDC42EP4Q9H3Q1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.64■■□□□ 1.06
CDC42EP4Q9H3Q1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42EP4Q9H3Q1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.64■■□□□ 1.06
CDC42EP4Q9H3Q1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42EP4Q9H3Q1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 AL121603.2-201ENST00000557373 2117 ntBASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MIR6724-1-201ENST00000616420 92 ntBASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MIR6724-2-201ENST00000616483 92 ntBASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MIR6724-4-201ENST00000617390 92 ntBASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MIR6724-3-201ENST00000622482 92 ntBASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42EP4Q9H3Q1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDC42EP4Q9H3Q1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 OR2I1P-207ENST00000453522 948 ntBASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 AC003102.1-202ENST00000563394 1796 ntBASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDC42EP4Q9H3Q1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CDC42EP4Q9H3Q1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 AC010141.3-201ENST00000456659 717 ntBASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 AC099791.2-201ENST00000605725 427 ntBASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 AC087239.1-201ENST00000622671 572 ntBASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDC42EP4Q9H3Q1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDC42EP4Q9H3Q1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms