Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A1Q9H2H9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC38A1Q9H2H9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC38A1Q9H2H9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 TSPY26P-201ENST00000476365 1326 ntBASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC38A1Q9H2H9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 AL355001.2-201ENST00000620617 1191 ntBASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC38A1Q9H2H9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 AL024507.2-201ENST00000606070 2574 ntBASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 MIR939-201ENST00000401314 82 ntBASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 AL031432.3-201ENST00000607698 485 ntBASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC38A1Q9H2H9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 AF213884.3-201ENST00000563833 479 ntBASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SLC38A1Q9H2H9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 AC105233.4-201ENST00000642045 216 ntBASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 RASA4CP-201ENST00000424092 1398 ntBASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC38A1Q9H2H9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms