Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 AC092028.1-203ENST00000608262 953 ntBASIC17.93■□□□□ 0.46
ALX4Q9H161 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ALX4Q9H161 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ALX4Q9H161 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALX4Q9H161 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.92■□□□□ 0.46
ALX4Q9H161 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.92■□□□□ 0.46
ALX4Q9H161 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.92■□□□□ 0.46
ALX4Q9H161 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 AL049796.1-201ENST00000565336 1766 ntBASIC17.92■□□□□ 0.46
ALX4Q9H161 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
ALX4Q9H161 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ALX4Q9H161 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ALX4Q9H161 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.92■□□□□ 0.46
ALX4Q9H161 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ALX4Q9H161 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALX4Q9H161 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ALX4Q9H161 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
ALX4Q9H161 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.91■□□□□ 0.46
ALX4Q9H161 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
ALX4Q9H161 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
ALX4Q9H161 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 AL356441.2-201ENST00000443009 864 ntBASIC17.91■□□□□ 0.46
ALX4Q9H161 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ALX4Q9H161 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
ALX4Q9H161 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALX4Q9H161 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 AP005212.1-201ENST00000581547 1997 ntBASIC17.9■□□□□ 0.46
ALX4Q9H161 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.9■□□□□ 0.46
ALX4Q9H161 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ALX4Q9H161 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
ALX4Q9H161 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ALX4Q9H161 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ALX4Q9H161 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ALX4Q9H161 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ALX4Q9H161 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.89■□□□□ 0.45
ALX4Q9H161 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 KRT16P3-201ENST00000439127 1283 ntBASIC17.89■□□□□ 0.45
ALX4Q9H161 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ALX4Q9H161 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.89■□□□□ 0.45
ALX4Q9H161 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.89■□□□□ 0.45
ALX4Q9H161 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ALX4Q9H161 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ALX4Q9H161 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.88■□□□□ 0.45
ALX4Q9H161 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
ALX4Q9H161 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.88■□□□□ 0.45
ALX4Q9H161 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.88■□□□□ 0.45
ALX4Q9H161 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.88■□□□□ 0.45
ALX4Q9H161 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.88■□□□□ 0.45
ALX4Q9H161 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.88■□□□□ 0.45
ALX4Q9H161 AL391422.3-201ENST00000603791 2761 ntBASIC17.88■□□□□ 0.45
ALX4Q9H161 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALX4Q9H161 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ALX4Q9H161 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms