Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 POU5F1P3-201ENST00000428824 1078 ntBASIC20.28■□□□□ 0.84
STRADBQ9C0K7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 AC092118.2-201ENST00000613495 667 ntBASIC20.28■□□□□ 0.84
STRADBQ9C0K7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
STRADBQ9C0K7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 AC016405.3-201ENST00000607710 860 ntBASIC20.27■□□□□ 0.84
STRADBQ9C0K7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
STRADBQ9C0K7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
STRADBQ9C0K7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
STRADBQ9C0K7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
STRADBQ9C0K7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 KRT18P29-201ENST00000397031 1267 ntBASIC20.26■□□□□ 0.83
STRADBQ9C0K7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
STRADBQ9C0K7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.25■□□□□ 0.83
STRADBQ9C0K7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 BX276092.2-201ENST00000417668 665 ntBASIC20.24■□□□□ 0.83
STRADBQ9C0K7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 ITM2C-210ENST00000620962 501 ntBASIC20.24■□□□□ 0.83
STRADBQ9C0K7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 KRT16P2-201ENST00000414673 1423 ntBASIC20.24■□□□□ 0.83
STRADBQ9C0K7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
STRADBQ9C0K7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AC093787.1-201ENST00000450396 207 ntBASIC20.23■□□□□ 0.83
STRADBQ9C0K7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AL162412.1-201ENST00000567129 965 ntBASIC20.23■□□□□ 0.83
STRADBQ9C0K7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AL591742.1-201ENST00000604433 565 ntBASIC20.23■□□□□ 0.83
STRADBQ9C0K7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
STRADBQ9C0K7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms