Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 pRNA.6-201ENST00000610482 90 ntBASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 pRNA.5-201ENST00000612139 90 ntBASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 pRNA.11-201ENST00000618423 90 ntBASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 pRNA.13-201ENST00000619112 90 ntBASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.27■□□□□ 0.84
THUMPD3Q9BV44 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
THUMPD3Q9BV44 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THUMPD3Q9BV44 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
THUMPD3Q9BV44 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 SRD5A1P1-201ENST00000442297 786 ntBASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 AC131212.1-201ENST00000613771 668 ntBASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
THUMPD3Q9BV44 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD3Q9BV44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 AC006455.2-201ENST00000429931 906 ntBASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 MIR4466-201ENST00000606121 54 ntBASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD3Q9BV44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 AC073130.3-201ENST00000624389 2278 ntBASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 AC131281.2-201ENST00000520478 145 ntBASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD3Q9BV44 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 AC068587.7-201ENST00000641602 218 ntBASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD3Q9BV44 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD3Q9BV44 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms