Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC6Q99741 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC6Q99741 LINC01960-201ENST00000563759 1884 ntBASIC20.62■□□□□ 0.89
CDC6Q99741 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDC6Q99741 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC6Q99741 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC6Q99741 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC6Q99741 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDC6Q99741 RPS2P4-201ENST00000476944 856 ntBASIC20.62■□□□□ 0.89
CDC6Q99741 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC6Q99741 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC6Q99741 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDC6Q99741 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC6Q99741 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC6Q99741 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDC6Q99741 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC6Q99741 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC6Q99741 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC6Q99741 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC6Q99741 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.61■□□□□ 0.89
CDC6Q99741 POU5F1P4-201ENST00000413175 1085 ntBASIC20.61■□□□□ 0.89
CDC6Q99741 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CDC6Q99741 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC6Q99741 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC6Q99741 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
CDC6Q99741 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC6Q99741 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC6Q99741 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDC6Q99741 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC6Q99741 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC6Q99741 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC6Q99741 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC6Q99741 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDC6Q99741 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC6Q99741 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC6Q99741 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDC6Q99741 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 AC128676.1-201ENST00000454392 318 ntBASIC20.6■□□□□ 0.89
CDC6Q99741 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC6Q99741 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC6Q99741 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 AL591742.1-201ENST00000604433 565 ntBASIC20.6■□□□□ 0.89
CDC6Q99741 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDC6Q99741 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDC6Q99741 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.6■□□□□ 0.89
CDC6Q99741 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC6Q99741 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC6Q99741 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC6Q99741 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.59■□□□□ 0.89
CDC6Q99741 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC6Q99741 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC6Q99741 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC6Q99741 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC6Q99741 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC6Q99741 AP006587.3-201ENST00000525742 1516 ntBASIC20.58■□□□□ 0.89
CDC6Q99741 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC6Q99741 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC6Q99741 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDC6Q99741 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.58■□□□□ 0.89
CDC6Q99741 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC6Q99741 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.58■□□□□ 0.89
CDC6Q99741 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.58■□□□□ 0.89
CDC6Q99741 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.58■□□□□ 0.89
CDC6Q99741 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC6Q99741 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC6Q99741 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.58■□□□□ 0.88
CDC6Q99741 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
CDC6Q99741 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDC6Q99741 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC6Q99741 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDC6Q99741 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.57■□□□□ 0.88
CDC6Q99741 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.57■□□□□ 0.88
CDC6Q99741 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC6Q99741 AC010980.2-201ENST00000587099 1412 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms